DR97_3231 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DR97_3231

Alkylhydroperoxidase ahpd family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity (145 aa)

Predicted Functional Partners:

DR97_3232

0.950

DR97_3234

0.855

DR97_3230

0.714

rplQ

0.548

cysN/C

0.504

DR97_3233

0.435

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_3230	DR97_3231	DR97_3230	DR97_3231	annotation not available	Alkylhydroperoxidase ahpd family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	0.714
DR97_3230	DR97_3232	DR97_3230	DR97_3232	annotation not available	annotation not available	0.571
DR97_3230	DR97_3234	DR97_3230	DR97_3234	annotation not available	annotation not available	0.503
DR97_3231	DR97_3230	DR97_3231	DR97_3230	Alkylhydroperoxidase ahpd family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	annotation not available	0.714
DR97_3231	DR97_3232	DR97_3231	DR97_3232	Alkylhydroperoxidase ahpd family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	annotation not available	0.950
DR97_3231	DR97_3233	DR97_3231	DR97_3233	Alkylhydroperoxidase ahpd family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family	0.435
DR97_3231	DR97_3234	DR97_3231	DR97_3234	Alkylhydroperoxidase ahpd family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	annotation not available	0.855
DR97_3231	cysN/C	DR97_3231	DR97_1620	Alkylhydroperoxidase ahpd family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; ATP sulfurylase may be the GTPase, regulating ATP sulfurylase activity	0.504
DR97_3231	rplQ	DR97_3231	DR97_3674	Alkylhydroperoxidase ahpd family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	Large subunit ribosomal protein l17; L17: ribosomal protein L17	0.548
DR97_3232	DR97_3230	DR97_3232	DR97_3230	annotation not available	annotation not available	0.571
DR97_3232	DR97_3231	DR97_3232	DR97_3231	annotation not available	Alkylhydroperoxidase ahpd family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	0.950
DR97_3232	DR97_3233	DR97_3232	DR97_3233	annotation not available	Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family	0.511
DR97_3232	DR97_3234	DR97_3232	DR97_3234	annotation not available	annotation not available	0.873
DR97_3233	DR97_3231	DR97_3233	DR97_3231	Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family	Alkylhydroperoxidase ahpd family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	0.435
DR97_3233	DR97_3232	DR97_3233	DR97_3232	Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family	annotation not available	0.511
DR97_3233	DR97_3234	DR97_3233	DR97_3234	Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family	annotation not available	0.451
DR97_3234	DR97_3230	DR97_3234	DR97_3230	annotation not available	annotation not available	0.503
DR97_3234	DR97_3231	DR97_3234	DR97_3231	annotation not available	Alkylhydroperoxidase ahpd family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	0.855
DR97_3234	DR97_3232	DR97_3234	DR97_3232	annotation not available	annotation not available	0.873
DR97_3234	DR97_3233	DR97_3234	DR97_3233	annotation not available	Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family	0.451

page 1 of 2

Network

Neighborhood

Experiments

Cooccurrence

Textmining

Coexpression

Databases

Fusion

© STRING Consortium 2021

Credits

Access

Info

About