Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2240 | desA | DR97_2240 | DR97_3248 | annotation not available | annotation not available | 0.800 |
DR97_2240 | desB | DR97_2240 | DR97_2239 | annotation not available | annotation not available | 0.997 |
DR97_2240 | desT | DR97_2240 | DR97_2241 | annotation not available | annotation not available | 0.736 |
DR97_3247 | desA | DR97_3247 | DR97_3248 | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | annotation not available | 0.553 |
DR97_4684 | desA | DR97_4684 | DR97_3248 | annotation not available | annotation not available | 0.577 |
Gda1 | GuaD | DR97_415 | DR97_3091 | Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia | Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia | 0.805 |
Gda1 | desA | DR97_415 | DR97_3248 | Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia | annotation not available | 0.673 |
GuaD | Gda1 | DR97_3091 | DR97_415 | Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia | Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia | 0.805 |
GuaD | desA | DR97_3091 | DR97_3248 | Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia | annotation not available | 0.673 |
dacB | desA | DR97_4889 | DR97_3248 | Serine-type d-ala-d-ala carboxypeptidase/endopeptidase (penicillin-binding protein 4); PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | annotation not available | 0.481 |
desA | DR97_2240 | DR97_3248 | DR97_2240 | annotation not available | annotation not available | 0.800 |
desA | DR97_3247 | DR97_3248 | DR97_3247 | annotation not available | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | 0.553 |
desA | DR97_4684 | DR97_3248 | DR97_4684 | annotation not available | annotation not available | 0.577 |
desA | Gda1 | DR97_3248 | DR97_415 | annotation not available | Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia | 0.673 |
desA | GuaD | DR97_3248 | DR97_3091 | annotation not available | Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia | 0.673 |
desA | dacB | DR97_3248 | DR97_4889 | annotation not available | Serine-type d-ala-d-ala carboxypeptidase/endopeptidase (penicillin-binding protein 4); PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | 0.481 |
desA | desB | DR97_3248 | DR97_2239 | annotation not available | annotation not available | 0.978 |
desA | desT | DR97_3248 | DR97_2241 | annotation not available | annotation not available | 0.875 |
desA | fabA | DR97_3248 | DR97_279 | annotation not available | 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length (By similarity) | 0.864 |
desA | fabB | DR97_3248 | DR97_280 | annotation not available | 3-oxoacyl-[acyl-carrier-protein] synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family | 0.522 |
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