STRINGSTRING
aguR protein (Pseudomonas aeruginosa) - STRING interaction network
"aguR" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aguRannotation not available (221 aa)    
Predicted Functional Partners:
aguB
agmatine_aguB- N-carbamoylputrescine amidase (292 aa)
         
  0.923
aguA
Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine (368 aa)
         
  0.907
speA
Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine (636 aa)
           
  0.839
DR97_3821
annotation not available (139 aa)
   
          0.759
DR97_25
Uncharacterized protein (91 aa)
   
          0.745
DR97_1013
Uncharacterized protein (141 aa)
   
          0.738
DR97_2308
annotation not available (503 aa)
   
          0.731
algP
annotation not available (356 aa)
   
          0.725
DR97_2825
DUF1127 domain-containing protein (67 aa)
   
          0.723
DR97_1716
Uncharacterized protein (209 aa)
   
          0.718
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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