Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3161 | DR97_3162 | DR97_3161 | DR97_3162 | annotation not available | annotation not available | 0.981 |
DR97_3161 | DR97_3289 | DR97_3161 | DR97_3289 | annotation not available | annotation not available | 0.870 |
DR97_3161 | potB | DR97_3161 | DR97_4331 | annotation not available | annotation not available | 0.876 |
DR97_3161 | spuE | DR97_3161 | DR97_3263 | annotation not available | Bacterial extracellular solute-binding family protein; Spermidine-binding protein probably required for its uptake into cells. Binds spermidine with high affinity (KD=14.3 nM). Does not bind putrescine, cadaverine or spermine. Spermidine binding induces large inter-domain conformational changes. Implicated in induction of type 3 secretion systems (T3SS), which play a role in virulence | 0.834 |
DR97_3161 | spuF | DR97_3161 | DR97_3264 | annotation not available | Polyamine abc transporter, atp-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system | 0.901 |
DR97_3161 | spuG | DR97_3161 | DR97_3265 | annotation not available | annotation not available | 0.958 |
DR97_3162 | DR97_3161 | DR97_3162 | DR97_3161 | annotation not available | annotation not available | 0.981 |
DR97_3162 | DR97_3288 | DR97_3162 | DR97_3288 | annotation not available | annotation not available | 0.871 |
DR97_3162 | potC | DR97_3162 | DR97_4330 | annotation not available | annotation not available | 0.962 |
DR97_3162 | spuE | DR97_3162 | DR97_3263 | annotation not available | Bacterial extracellular solute-binding family protein; Spermidine-binding protein probably required for its uptake into cells. Binds spermidine with high affinity (KD=14.3 nM). Does not bind putrescine, cadaverine or spermine. Spermidine binding induces large inter-domain conformational changes. Implicated in induction of type 3 secretion systems (T3SS), which play a role in virulence | 0.808 |
DR97_3162 | spuF | DR97_3162 | DR97_3264 | annotation not available | Polyamine abc transporter, atp-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system | 0.896 |
DR97_3162 | spuH | DR97_3162 | DR97_3266 | annotation not available | annotation not available | 0.956 |
DR97_3176 | spuE | DR97_3176 | DR97_3263 | 4-(gamma-glutamylamino)butanal dehydrogenase; Belongs to the aldehyde dehydrogenase family | Bacterial extracellular solute-binding family protein; Spermidine-binding protein probably required for its uptake into cells. Binds spermidine with high affinity (KD=14.3 nM). Does not bind putrescine, cadaverine or spermine. Spermidine binding induces large inter-domain conformational changes. Implicated in induction of type 3 secretion systems (T3SS), which play a role in virulence | 0.848 |
DR97_3288 | DR97_3162 | DR97_3288 | DR97_3162 | annotation not available | annotation not available | 0.871 |
DR97_3288 | DR97_3289 | DR97_3288 | DR97_3289 | annotation not available | annotation not available | 0.997 |
DR97_3288 | potB | DR97_3288 | DR97_4331 | annotation not available | annotation not available | 0.974 |
DR97_3288 | potC | DR97_3288 | DR97_4330 | annotation not available | annotation not available | 0.819 |
DR97_3288 | spuE | DR97_3288 | DR97_3263 | annotation not available | Bacterial extracellular solute-binding family protein; Spermidine-binding protein probably required for its uptake into cells. Binds spermidine with high affinity (KD=14.3 nM). Does not bind putrescine, cadaverine or spermine. Spermidine binding induces large inter-domain conformational changes. Implicated in induction of type 3 secretion systems (T3SS), which play a role in virulence | 0.838 |
DR97_3288 | spuF | DR97_3288 | DR97_3264 | annotation not available | Polyamine abc transporter, atp-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system | 0.900 |
DR97_3288 | spuG | DR97_3288 | DR97_3265 | annotation not available | annotation not available | 0.868 |
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