Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3286 | DR97_366 | DR97_3286 | DR97_366 | annotation not available | annotation not available | 0.414 |
DR97_3286 | DR97_6239 | DR97_3286 | DR97_6239 | annotation not available | annotation not available | 0.687 |
DR97_3286 | aphB | DR97_3286 | DR97_3285 | annotation not available | Histone deacetylase domain protein; Catalyzes the deacetylation of acetylated polyamines such as N-acetylputrescine and N-acetylcadaverine. Plays an important role in the metabolism of acetylated polyamines in P.aeruginosa. Is involved in the degradation pathways of N-acetylputrescine and N-acetylcadaverine, that allow P.aeruginosa to utilize these acetylpolyamines as a carbon source under glucose starvation. Shows nearly no activity against N(1)- acetylspermine and N(1)-acetylspermidine. Can also hydrolyze artificial trifluoroacetylated lysine-derivative, and to a lesser extent, acety [...] | 0.838 |
DR97_3286 | glgE | DR97_3286 | DR97_6275 | annotation not available | Starch synthase (maltosyl-transferring); Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB | 0.687 |
DR97_3286 | treS | DR97_3286 | DR97_6274 | annotation not available | Maltose alpha-d-glucosyltransferase / alpha-amylase; treS_nterm: trehalose synthase | 0.687 |
DR97_366 | DR97_3286 | DR97_366 | DR97_3286 | annotation not available | annotation not available | 0.414 |
DR97_6239 | DR97_3286 | DR97_6239 | DR97_3286 | annotation not available | annotation not available | 0.687 |
DR97_6239 | glgE | DR97_6239 | DR97_6275 | annotation not available | Starch synthase (maltosyl-transferring); Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB | 0.477 |
DR97_6239 | treS | DR97_6239 | DR97_6274 | annotation not available | Maltose alpha-d-glucosyltransferase / alpha-amylase; treS_nterm: trehalose synthase | 0.477 |
aphB | DR97_3286 | DR97_3285 | DR97_3286 | Histone deacetylase domain protein; Catalyzes the deacetylation of acetylated polyamines such as N-acetylputrescine and N-acetylcadaverine. Plays an important role in the metabolism of acetylated polyamines in P.aeruginosa. Is involved in the degradation pathways of N-acetylputrescine and N-acetylcadaverine, that allow P.aeruginosa to utilize these acetylpolyamines as a carbon source under glucose starvation. Shows nearly no activity against N(1)- acetylspermine and N(1)-acetylspermidine. Can also hydrolyze artificial trifluoroacetylated lysine-derivative, and to a lesser extent, acety [...] | annotation not available | 0.838 |
glgE | DR97_3286 | DR97_6275 | DR97_3286 | Starch synthase (maltosyl-transferring); Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB | annotation not available | 0.687 |
glgE | DR97_6239 | DR97_6275 | DR97_6239 | Starch synthase (maltosyl-transferring); Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB | annotation not available | 0.477 |
glgE | treS | DR97_6275 | DR97_6274 | Starch synthase (maltosyl-transferring); Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB | Maltose alpha-d-glucosyltransferase / alpha-amylase; treS_nterm: trehalose synthase | 0.998 |
treS | DR97_3286 | DR97_6274 | DR97_3286 | Maltose alpha-d-glucosyltransferase / alpha-amylase; treS_nterm: trehalose synthase | annotation not available | 0.687 |
treS | DR97_6239 | DR97_6274 | DR97_6239 | Maltose alpha-d-glucosyltransferase / alpha-amylase; treS_nterm: trehalose synthase | annotation not available | 0.477 |
treS | glgE | DR97_6274 | DR97_6275 | Maltose alpha-d-glucosyltransferase / alpha-amylase; treS_nterm: trehalose synthase | Starch synthase (maltosyl-transferring); Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB | 0.998 |