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STRINGSTRING
DR97_3309 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_3309" - fkbM_fam: methyltransferase, FkbM family domain protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_3309fkbM_fam- methyltransferase, FkbM family domain protein (265 aa)    
Predicted Functional Partners:
DR97_3311
Putative membrane protein (461 aa)
   
        0.747
DR97_3310
annotation not available (459 aa)
   
        0.744
wbpX
annotation not available (460 aa)
   
  0.738
wbpY
annotation not available (375 aa)
   
  0.735
DR97_2834
annotation not available (542 aa)
 
   
  0.692
DR97_2835
annotation not available (433 aa)
 
   
  0.683
pslD
annotation not available (256 aa)
   
 
  0.679
pslA
Putative glycosyl transferase; wcaJ_sugtrans- undecaprenyl-phosphate glucose phosphotransferase (478 aa)
   
   
  0.665
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (323 aa)
 
 
  0.651
rmd
annotation not available (304 aa)
 
   
  0.621
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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