Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3355 | DR97_3358 | DR97_3355 | DR97_3358 | Conserved hypothetical protein | annotation not available | 0.537 |
DR97_3355 | DR97_3359 | DR97_3355 | DR97_3359 | Conserved hypothetical protein | Uncharacterized protein; Belongs to the UPF0235 family | 0.515 |
DR97_3355 | DR97_3360 | DR97_3355 | DR97_3360 | Conserved hypothetical protein | annotation not available | 0.470 |
DR97_3355 | DR97_3362 | DR97_3355 | DR97_3362 | Conserved hypothetical protein | Plp dependent protein; Perhaps involved in proline biosynthesis | 0.469 |
DR97_3355 | metW | DR97_3355 | DR97_3356 | Conserved hypothetical protein | Putative methionine biosynthesis protein; metW: methionine biosynthesis protein MetW | 0.923 |
DR97_3355 | metX | DR97_3355 | DR97_3357 | Conserved hypothetical protein | Homoserine o-acetyltransferase/o-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine | 0.679 |
DR97_3355 | pilT | DR97_3355 | DR97_3363 | Conserved hypothetical protein | Twitching motility protein pilt; May be involved in pilus retraction | 0.442 |
DR97_3355 | proC | DR97_3355 | DR97_3361 | Conserved hypothetical protein | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline | 0.470 |
DR97_3355 | rdgB | DR97_3355 | DR97_3354 | Conserved hypothetical protein | Non-canonical purine ntp pyrophosphatase, rdgb/ham1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions | 0.894 |
DR97_3358 | DR97_3355 | DR97_3358 | DR97_3355 | annotation not available | Conserved hypothetical protein | 0.537 |
DR97_3358 | DR97_3359 | DR97_3358 | DR97_3359 | annotation not available | Uncharacterized protein; Belongs to the UPF0235 family | 0.632 |
DR97_3358 | DR97_3360 | DR97_3358 | DR97_3360 | annotation not available | annotation not available | 0.604 |
DR97_3358 | DR97_3362 | DR97_3358 | DR97_3362 | annotation not available | Plp dependent protein; Perhaps involved in proline biosynthesis | 0.574 |
DR97_3358 | metW | DR97_3358 | DR97_3356 | annotation not available | Putative methionine biosynthesis protein; metW: methionine biosynthesis protein MetW | 0.736 |
DR97_3358 | metX | DR97_3358 | DR97_3357 | annotation not available | Homoserine o-acetyltransferase/o-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine | 0.718 |
DR97_3358 | pilT | DR97_3358 | DR97_3363 | annotation not available | Twitching motility protein pilt; May be involved in pilus retraction | 0.493 |
DR97_3358 | proC | DR97_3358 | DR97_3361 | annotation not available | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline | 0.624 |
DR97_3358 | rdgB | DR97_3358 | DR97_3354 | annotation not available | Non-canonical purine ntp pyrophosphatase, rdgb/ham1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions | 0.558 |
DR97_3359 | DR97_3355 | DR97_3359 | DR97_3355 | Uncharacterized protein; Belongs to the UPF0235 family | Conserved hypothetical protein | 0.515 |
DR97_3359 | DR97_3358 | DR97_3359 | DR97_3358 | Uncharacterized protein; Belongs to the UPF0235 family | annotation not available | 0.632 |
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