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yqgF protein (Pseudomonas aeruginosa) - STRING interaction network
"yqgF" - Putative pre-16S rRNA nuclease in Pseudomonas aeruginosa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
yqgFPutative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (144 aa)    
Predicted Functional Partners:
algH
UPF0301 protein AOY09_06049; Belongs to the UPF0301 (AlgH) family (189 aa)
   
   
  0.968
rsmE
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (240 aa)
        0.823
gshB
Glut_syn- glutathione synthase; Belongs to the prokaryotic GSH synthase family (317 aa)
          0.799
DR97_3374
tonB_Cterm- TonB family C-terminal domain protein (297 aa)
   
        0.789
DR97_3015
Uncharacterized protein (234 aa)
 
            0.702
pyrR
Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant (170 aa)
              0.696
pyrC'
Multifunctional complex type domain protein; pyrC_multi- dihydroorotase, multifunctional complex type domain protein (423 aa)
   
        0.686
DR97_3014
annotation not available (295 aa)
 
        0.672
pyrB
Asp_carb_tr- aspartate carbamoyltransferase; Belongs to the ATCase/OTCase family (334 aa)
              0.669
DR97_4955
Putative competence protein; comEC_Rec2- DNA internalization-related competence protein ComEC/Rec2 (741 aa)
 
        0.636
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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