Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3389 | DR97_3390 | DR97_3389 | DR97_3390 | annotation not available | Hypothetical protein; Cytochrome b561 homolog 2 | 0.482 |
DR97_3389 | YceI | DR97_3389 | DR97_3391 | annotation not available | annotation not available | 0.485 |
DR97_3389 | bioA | DR97_3389 | DR97_3388 | annotation not available | Adenosylmethionine---8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor | 0.611 |
DR97_3390 | DR97_3389 | DR97_3390 | DR97_3389 | Hypothetical protein; Cytochrome b561 homolog 2 | annotation not available | 0.482 |
DR97_3390 | YceI | DR97_3390 | DR97_3391 | Hypothetical protein; Cytochrome b561 homolog 2 | annotation not available | 0.973 |
DR97_3390 | bioA | DR97_3390 | DR97_3388 | Hypothetical protein; Cytochrome b561 homolog 2 | Adenosylmethionine---8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor | 0.490 |
FbpA | YceI | DR97_2586 | DR97_3391 | Putative binding protein component of abc iron transporter; Belongs to the bacterial solute-binding protein 1 family | annotation not available | 0.845 |
FbpA | fbpA | DR97_2586 | DR97_2023 | Putative binding protein component of abc iron transporter; Belongs to the bacterial solute-binding protein 1 family | annotation not available | 0.850 |
YceI | DR97_3389 | DR97_3391 | DR97_3389 | annotation not available | annotation not available | 0.485 |
YceI | DR97_3390 | DR97_3391 | DR97_3390 | annotation not available | Hypothetical protein; Cytochrome b561 homolog 2 | 0.973 |
YceI | FbpA | DR97_3391 | DR97_2586 | annotation not available | Putative binding protein component of abc iron transporter; Belongs to the bacterial solute-binding protein 1 family | 0.845 |
YceI | bioA | DR97_3391 | DR97_3388 | annotation not available | Adenosylmethionine---8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor | 0.481 |
YceI | fbpA | DR97_3391 | DR97_2023 | annotation not available | annotation not available | 0.683 |
YceI | lpd3 | DR97_3391 | DR97_2179 | annotation not available | Dihydrolipoamide dehydrogenase; LPD-3 may substitute for lipoamide dehydrogenase of the 2- oxoglutarate dehydrogenase and pyruvate multienzyme complexes when the latter is inactive or missing | 0.508 |
YceI | lpdG | DR97_3391 | DR97_302 | annotation not available | Dihydrolipoamide dehydrogenase; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of 3 enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity) | 0.433 |
YceI | lpdV | DR97_3391 | DR97_6300 | annotation not available | Dihydrolipoamide dehydrogenase; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of 3 enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity) | 0.509 |
YceI | rplU | DR97_3391 | DR97_1872 | annotation not available | Large subunit ribosomal protein l21; This protein binds to 23S rRNA in the presence of protein L20 | 0.443 |
YceI | usg | DR97_3391 | DR97_4817 | annotation not available | Belongs to the aspartate-semialdehyde dehydrogenase family | 0.504 |
bioA | DR97_3389 | DR97_3388 | DR97_3389 | Adenosylmethionine---8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor | annotation not available | 0.611 |
bioA | DR97_3390 | DR97_3388 | DR97_3390 | Adenosylmethionine---8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor | Hypothetical protein; Cytochrome b561 homolog 2 | 0.490 |
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