Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AmaB | DR97_3404 | DR97_3411 | DR97_3404 | Beta-ureidopropionase / n-carbamoyl-l-amino-acid hydrolase; Allantoate amidohydrolase; Hydantase: amidase, hydantoinase/carbamoylase family protein | annotation not available | 0.435 |
AmaB | DR97_3410 | DR97_3411 | DR97_3410 | Beta-ureidopropionase / n-carbamoyl-l-amino-acid hydrolase; Allantoate amidohydrolase; Hydantase: amidase, hydantoinase/carbamoylase family protein | annotation not available | 0.909 |
AmaB | GltX | DR97_3411 | DR97_3408 | Beta-ureidopropionase / n-carbamoyl-l-amino-acid hydrolase; Allantoate amidohydrolase; Hydantase: amidase, hydantoinase/carbamoylase family protein | annotation not available | 0.881 |
AmaB | PydA | DR97_3411 | DR97_3407 | Beta-ureidopropionase / n-carbamoyl-l-amino-acid hydrolase; Allantoate amidohydrolase; Hydantase: amidase, hydantoinase/carbamoylase family protein | NAD-dependent dihydropyrimidine dehydrogenase subunit PreA; pyrD_sub1_fam: dihydroorotate dehydrogenase family domain protein | 0.946 |
AmaB | hydA | DR97_3411 | DR97_3409 | Beta-ureidopropionase / n-carbamoyl-l-amino-acid hydrolase; Allantoate amidohydrolase; Hydantase: amidase, hydantoinase/carbamoylase family protein | Dihydropyrimidinase; Catalyzes the hydrolysis of dihydropyrimidines and of the structurally related DL-5-mono-substituted hydantoins, to produce N- carbamoyl-D-amino acids | 0.972 |
DR97_3404 | AmaB | DR97_3404 | DR97_3411 | annotation not available | Beta-ureidopropionase / n-carbamoyl-l-amino-acid hydrolase; Allantoate amidohydrolase; Hydantase: amidase, hydantoinase/carbamoylase family protein | 0.435 |
DR97_3404 | DR97_3410 | DR97_3404 | DR97_3410 | annotation not available | annotation not available | 0.531 |
DR97_3404 | GltX | DR97_3404 | DR97_3408 | annotation not available | annotation not available | 0.476 |
DR97_3404 | PydA | DR97_3404 | DR97_3407 | annotation not available | NAD-dependent dihydropyrimidine dehydrogenase subunit PreA; pyrD_sub1_fam: dihydroorotate dehydrogenase family domain protein | 0.633 |
DR97_3404 | hydA | DR97_3404 | DR97_3409 | annotation not available | Dihydropyrimidinase; Catalyzes the hydrolysis of dihydropyrimidines and of the structurally related DL-5-mono-substituted hydantoins, to produce N- carbamoyl-D-amino acids | 0.547 |
DR97_3410 | AmaB | DR97_3410 | DR97_3411 | annotation not available | Beta-ureidopropionase / n-carbamoyl-l-amino-acid hydrolase; Allantoate amidohydrolase; Hydantase: amidase, hydantoinase/carbamoylase family protein | 0.909 |
DR97_3410 | DR97_3404 | DR97_3410 | DR97_3404 | annotation not available | annotation not available | 0.531 |
DR97_3410 | GltX | DR97_3410 | DR97_3408 | annotation not available | annotation not available | 0.528 |
DR97_3410 | PydA | DR97_3410 | DR97_3407 | annotation not available | NAD-dependent dihydropyrimidine dehydrogenase subunit PreA; pyrD_sub1_fam: dihydroorotate dehydrogenase family domain protein | 0.740 |
DR97_3410 | hydA | DR97_3410 | DR97_3409 | annotation not available | Dihydropyrimidinase; Catalyzes the hydrolysis of dihydropyrimidines and of the structurally related DL-5-mono-substituted hydantoins, to produce N- carbamoyl-D-amino acids | 0.795 |
DR97_3410 | pyrQ | DR97_3410 | DR97_2920 | annotation not available | annotation not available | 0.444 |
GltX | AmaB | DR97_3408 | DR97_3411 | annotation not available | Beta-ureidopropionase / n-carbamoyl-l-amino-acid hydrolase; Allantoate amidohydrolase; Hydantase: amidase, hydantoinase/carbamoylase family protein | 0.881 |
GltX | DR97_3404 | DR97_3408 | DR97_3404 | annotation not available | annotation not available | 0.476 |
GltX | DR97_3410 | DR97_3408 | DR97_3410 | annotation not available | annotation not available | 0.528 |
GltX | PydA | DR97_3408 | DR97_3407 | annotation not available | NAD-dependent dihydropyrimidine dehydrogenase subunit PreA; pyrD_sub1_fam: dihydroorotate dehydrogenase family domain protein | 0.999 |
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