bbsF_1 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Score

bbsF_1

annotation not available (407 aa)

Predicted Functional Partners:

Gcdh

0.888

gcvA_8

0.472

amaB

0.423

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Gcdh	bbsF_1	DR97_3413	DR97_3412	Glutaryl-CoA dehydrogenase, mitochondrial; acyl-CoA dehydrogenase, N-terminal domain protein	annotation not available	0.888
Gcdh	gcvA_8	DR97_3413	DR97_3414	Glutaryl-CoA dehydrogenase, mitochondrial; acyl-CoA dehydrogenase, N-terminal domain protein	annotation not available	0.734
amaB	bbsF_1	DR97_3411	DR97_3412	Allantoate amidohydrolase; Hydantase: amidase, hydantoinase/carbamoylase family protein	annotation not available	0.423
bbsF_1	Gcdh	DR97_3412	DR97_3413	annotation not available	Glutaryl-CoA dehydrogenase, mitochondrial; acyl-CoA dehydrogenase, N-terminal domain protein	0.888
bbsF_1	amaB	DR97_3412	DR97_3411	annotation not available	Allantoate amidohydrolase; Hydantase: amidase, hydantoinase/carbamoylase family protein	0.423
bbsF_1	gcvA_8	DR97_3412	DR97_3414	annotation not available	annotation not available	0.472
gcvA_8	Gcdh	DR97_3414	DR97_3413	annotation not available	Glutaryl-CoA dehydrogenase, mitochondrial; acyl-CoA dehydrogenase, N-terminal domain protein	0.734
gcvA_8	bbsF_1	DR97_3414	DR97_3412	annotation not available	annotation not available	0.472

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