nfeD protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Score

nfeD

Uncharacterized protein; nfeD-like C-terminal, partner-binding family protein (443 aa)

Predicted Functional Partners:

DR97_3418

0.973

atpI

0.785

grp

0.753

DR97_6241

0.646

DR97_3420

0.561

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_3418	DR97_3420	DR97_3418	DR97_3420	annotation not available	annotation not available	0.571
DR97_3418	nfeD	DR97_3418	DR97_3417	annotation not available	Uncharacterized protein; nfeD-like C-terminal, partner-binding family protein	0.973
DR97_3420	DR97_3418	DR97_3420	DR97_3418	annotation not available	annotation not available	0.571
DR97_3420	nfeD	DR97_3420	DR97_3417	annotation not available	Uncharacterized protein; nfeD-like C-terminal, partner-binding family protein	0.561
DR97_6241	nfeD	DR97_6241	DR97_3417	annotation not available	Uncharacterized protein; nfeD-like C-terminal, partner-binding family protein	0.646
atpI	nfeD	DR97_2940	DR97_3417	annotation not available	Uncharacterized protein; nfeD-like C-terminal, partner-binding family protein	0.785
grp	nfeD	DR97_5819	DR97_3417	annotation not available	Uncharacterized protein; nfeD-like C-terminal, partner-binding family protein	0.753
nfeD	DR97_3418	DR97_3417	DR97_3418	Uncharacterized protein; nfeD-like C-terminal, partner-binding family protein	annotation not available	0.973
nfeD	DR97_3420	DR97_3417	DR97_3420	Uncharacterized protein; nfeD-like C-terminal, partner-binding family protein	annotation not available	0.561
nfeD	DR97_6241	DR97_3417	DR97_6241	Uncharacterized protein; nfeD-like C-terminal, partner-binding family protein	annotation not available	0.646
nfeD	atpI	DR97_3417	DR97_2940	Uncharacterized protein; nfeD-like C-terminal, partner-binding family protein	annotation not available	0.785
nfeD	grp	DR97_3417	DR97_5819	Uncharacterized protein; nfeD-like C-terminal, partner-binding family protein	annotation not available	0.753

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