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yccS protein (Pseudomonas aeruginosa) - STRING interaction network
"yccS" - YCCS_YHJK: integral membrane , YccS/YhfK family protein in Pseudomonas aeruginosa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
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[Homology]
Score
yccSYCCS_YHJK- integral membrane , YccS/YhfK family protein (733 aa)    
Predicted Functional Partners:
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5’-adenylate (BirA-bio- 5’-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon (312 aa)
           
  0.550
sprT
annotation not available (165 aa)
   
        0.504
DR97_2843
Uncharacterized protein (652 aa)
   
        0.459
yhhQ
Probable queuosine precursor transporter; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage (217 aa)
   
        0.448
dbpA
ATP-independent RNA helicase dbpA; Helicase conserved C-terminal domain protein; Belongs to the DEAD box helicase family (458 aa)
              0.442
fruR
annotation not available (329 aa)
   
          0.441
DR97_1948
Putative lipoprotein (195 aa)
   
          0.425
DR97_4017
annotation not available (334 aa)
   
          0.418
DR97_1738
annotation not available (340 aa)
   
          0.411
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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