Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3442 | DR97_3443 | DR97_3442 | DR97_3443 | Acyl-coenzyme a thioesterase 13; Belongs to the thioesterase PaaI family | annotation not available | 0.679 |
DR97_3442 | PsfA | DR97_3442 | DR97_3441 | Acyl-coenzyme a thioesterase 13; Belongs to the thioesterase PaaI family | Putative glutathione s-transferase; Glutathione S-transferase, N-terminal domain protein | 0.594 |
DR97_3443 | DR97_3442 | DR97_3443 | DR97_3442 | annotation not available | Acyl-coenzyme a thioesterase 13; Belongs to the thioesterase PaaI family | 0.679 |
DR97_3443 | DR97_6184 | DR97_3443 | DR97_6184 | annotation not available | Hypothetical protein; Putative transcriptional activator; pucR C-terminal helix-turn-helix domain protein | 0.492 |
DR97_3443 | PsfA | DR97_3443 | DR97_3441 | annotation not available | Putative glutathione s-transferase; Glutathione S-transferase, N-terminal domain protein | 0.427 |
DR97_6184 | DR97_3443 | DR97_6184 | DR97_3443 | Hypothetical protein; Putative transcriptional activator; pucR C-terminal helix-turn-helix domain protein | annotation not available | 0.492 |
PsfA | DR97_3442 | DR97_3441 | DR97_3442 | Putative glutathione s-transferase; Glutathione S-transferase, N-terminal domain protein | Acyl-coenzyme a thioesterase 13; Belongs to the thioesterase PaaI family | 0.594 |
PsfA | DR97_3443 | DR97_3441 | DR97_3443 | Putative glutathione s-transferase; Glutathione S-transferase, N-terminal domain protein | annotation not available | 0.427 |