Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CodB | DR97_3444 | DR97_2453 | DR97_3444 | Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family | annotation not available | 0.459 |
DR97_3444 | CodB | DR97_3444 | DR97_2453 | annotation not available | Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family | 0.459 |
DR97_3444 | DR97_5002 | DR97_3444 | DR97_5002 | annotation not available | Uric acid transporter UacT; pbuX: xanthine permease family protein | 0.533 |
DR97_3444 | DR97_5931 | DR97_3444 | DR97_5931 | annotation not available | Pucr family transcriptional regulator, purine catabolism regulatory protein; Regulatory protein; pucR C-terminal helix-turn-helix domain protein | 0.535 |
DR97_3444 | DR97_604 | DR97_3444 | DR97_604 | annotation not available | Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family | 0.497 |
DR97_3444 | DR97_605 | DR97_3444 | DR97_605 | annotation not available | Putative sodium:solute symport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family | 0.531 |
DR97_3444 | PydA | DR97_3444 | DR97_3407 | annotation not available | NAD-dependent dihydropyrimidine dehydrogenase subunit PreA; pyrD_sub1_fam: dihydroorotate dehydrogenase family domain protein | 0.493 |
DR97_3444 | YlbA | DR97_3444 | DR97_794 | annotation not available | annotation not available | 0.450 |
DR97_3444 | gpuP | DR97_3444 | DR97_3249 | annotation not available | Putative sodium:solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family | 0.585 |
DR97_3444 | hydA | DR97_3444 | DR97_3409 | annotation not available | Dihydropyrimidinase; Catalyzes the hydrolysis of dihydropyrimidines and of the structurally related DL-5-mono-substituted hydantoins, to produce N- carbamoyl-D-amino acids | 0.588 |
DR97_3444 | pyrQ | DR97_3444 | DR97_2920 | annotation not available | annotation not available | 0.480 |
DR97_5002 | DR97_3444 | DR97_5002 | DR97_3444 | Uric acid transporter UacT; pbuX: xanthine permease family protein | annotation not available | 0.533 |
DR97_5931 | DR97_3444 | DR97_5931 | DR97_3444 | Pucr family transcriptional regulator, purine catabolism regulatory protein; Regulatory protein; pucR C-terminal helix-turn-helix domain protein | annotation not available | 0.535 |
DR97_604 | DR97_3444 | DR97_604 | DR97_3444 | Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family | annotation not available | 0.497 |
DR97_604 | DR97_605 | DR97_604 | DR97_605 | Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family | Putative sodium:solute symport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family | 0.852 |
DR97_604 | gpuP | DR97_604 | DR97_3249 | Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family | Putative sodium:solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family | 0.545 |
DR97_605 | DR97_3444 | DR97_605 | DR97_3444 | Putative sodium:solute symport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family | annotation not available | 0.531 |
DR97_605 | DR97_604 | DR97_605 | DR97_604 | Putative sodium:solute symport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family | Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family | 0.852 |
PydA | DR97_3444 | DR97_3407 | DR97_3444 | NAD-dependent dihydropyrimidine dehydrogenase subunit PreA; pyrD_sub1_fam: dihydroorotate dehydrogenase family domain protein | annotation not available | 0.493 |
PydA | hydA | DR97_3407 | DR97_3409 | NAD-dependent dihydropyrimidine dehydrogenase subunit PreA; pyrD_sub1_fam: dihydroorotate dehydrogenase family domain protein | Dihydropyrimidinase; Catalyzes the hydrolysis of dihydropyrimidines and of the structurally related DL-5-mono-substituted hydantoins, to produce N- carbamoyl-D-amino acids | 0.997 |
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