STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_3444annotation not available (575 aa)    
Predicted Functional Partners:
hydA
Dihydropyrimidinase; Catalyzes the hydrolysis of dihydropyrimidines and of the structurally related DL-5-mono-substituted hydantoins, to produce N- carbamoyl-D-amino acids
 
 
 0.588
gpuP
Putative sodium:solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family
 
   
 0.585
DR97_5931
Pucr family transcriptional regulator, purine catabolism regulatory protein; Regulatory protein; pucR C-terminal helix-turn-helix domain protein
 
   
 0.535
DR97_5002
Uric acid transporter UacT; pbuX: xanthine permease family protein
 
  
 0.533
DR97_605
Putative sodium:solute symport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family
 
   
 0.531
DR97_604
Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family
  
   
 0.497
PydA
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA; pyrD_sub1_fam: dihydroorotate dehydrogenase family domain protein
 
     0.493
pyrQ
annotation not available
  
 
 0.480
CodB
Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family
  
   
 0.459
YlbA
annotation not available
 
     0.450
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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