Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ComF | DR97_3458 | DR97_3457 | DR97_3458 | annotation not available | annotation not available | 0.622 |
ComF | ModR | DR97_3457 | DR97_3455 | annotation not available | Molybdenum transport regulator; modE_repress: ModE molybdate transport repressor domain protein | 0.757 |
ComF | YfiM | DR97_3457 | DR97_3456 | annotation not available | Hypothetical protein; Putative secreted protein | 0.721 |
ComF | srkA | DR97_3457 | DR97_3454 | annotation not available | Phosphotransferase enzyme family protein; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response | 0.611 |
DR97_3017 | YfiM | DR97_3017 | DR97_3456 | Hypothetical protein; Putative secreted protein | Hypothetical protein; Putative secreted protein | 0.494 |
DR97_3210 | YfiM | DR97_3210 | DR97_3456 | annotation not available | Hypothetical protein; Putative secreted protein | 0.448 |
DR97_3458 | ComF | DR97_3458 | DR97_3457 | annotation not available | annotation not available | 0.622 |
DR97_3458 | ModR | DR97_3458 | DR97_3455 | annotation not available | Molybdenum transport regulator; modE_repress: ModE molybdate transport repressor domain protein | 0.444 |
DR97_3458 | YfiM | DR97_3458 | DR97_3456 | annotation not available | Hypothetical protein; Putative secreted protein | 0.449 |
DR97_3867 | YfiM | DR97_3867 | DR97_3456 | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | Hypothetical protein; Putative secreted protein | 0.858 |
ModR | ComF | DR97_3455 | DR97_3457 | Molybdenum transport regulator; modE_repress: ModE molybdate transport repressor domain protein | annotation not available | 0.757 |
ModR | DR97_3458 | DR97_3455 | DR97_3458 | Molybdenum transport regulator; modE_repress: ModE molybdate transport repressor domain protein | annotation not available | 0.444 |
ModR | YfiM | DR97_3455 | DR97_3456 | Molybdenum transport regulator; modE_repress: ModE molybdate transport repressor domain protein | Hypothetical protein; Putative secreted protein | 0.652 |
ModR | srkA | DR97_3455 | DR97_3454 | Molybdenum transport regulator; modE_repress: ModE molybdate transport repressor domain protein | Phosphotransferase enzyme family protein; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response | 0.665 |
YfiM | ComF | DR97_3456 | DR97_3457 | Hypothetical protein; Putative secreted protein | annotation not available | 0.721 |
YfiM | DR97_3017 | DR97_3456 | DR97_3017 | Hypothetical protein; Putative secreted protein | Hypothetical protein; Putative secreted protein | 0.494 |
YfiM | DR97_3210 | DR97_3456 | DR97_3210 | Hypothetical protein; Putative secreted protein | annotation not available | 0.448 |
YfiM | DR97_3458 | DR97_3456 | DR97_3458 | Hypothetical protein; Putative secreted protein | annotation not available | 0.449 |
YfiM | DR97_3867 | DR97_3456 | DR97_3867 | Hypothetical protein; Putative secreted protein | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | 0.858 |
YfiM | ModR | DR97_3456 | DR97_3455 | Hypothetical protein; Putative secreted protein | Molybdenum transport regulator; modE_repress: ModE molybdate transport repressor domain protein | 0.652 |
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