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STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
Node Content
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_3466
annotation not available (335 aa)
Predicted Functional Partners:
DR97_3467
Pili assembly chaperone PapD, C-terminal domain protein
0.949
cupC3
Usher CupC3; papC N-terminal domain protein
0.726
cupC2
Chaperone protein EcpD; Pili assembly chaperone PapD, C-terminal domain protein
0.687
DR97_3465
annotation not available
0.657
DR97_3218
Uncharacterized protein
0.638
DR97_3219
Conserved hypothetical protein
0.623
cupB3
papC N-terminal domain protein
0.613
cupA3
Usher CupA3; papC N-terminal domain protein
0.609
DR97_955
annotation not available
0.607
cupB2
Chaperone protein EcpD; Pili assembly chaperone PapD, C-terminal domain protein
STRING Data Update
