Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2901 | DR97_3503 | DR97_2901 | DR97_3503 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | annotation not available | 0.748 |
DR97_2901 | DR97_369 | DR97_2901 | DR97_369 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.605 |
DR97_2901 | DR97_5807 | DR97_2901 | DR97_5807 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.627 |
DR97_2901 | spuB | DR97_2901 | DR97_3260 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.661 |
DR97_2901 | spuI | DR97_2901 | DR97_3258 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.626 |
DR97_3389 | DR97_3503 | DR97_3389 | DR97_3503 | annotation not available | annotation not available | 0.697 |
DR97_3389 | DR97_4740 | DR97_3389 | DR97_4740 | annotation not available | Uncharacterized protein; DUF1289 domain-containing protein | 0.575 |
DR97_3389 | rlmN | DR97_3389 | DR97_4063 | annotation not available | 23S rRNA (adenine2503-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity | 0.576 |
DR97_3503 | DR97_2901 | DR97_3503 | DR97_2901 | annotation not available | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.748 |
DR97_3503 | DR97_3389 | DR97_3503 | DR97_3389 | annotation not available | annotation not available | 0.697 |
DR97_3503 | DR97_3504 | DR97_3503 | DR97_3504 | annotation not available | annotation not available | 0.929 |
DR97_3503 | DR97_369 | DR97_3503 | DR97_369 | annotation not available | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.739 |
DR97_3503 | DR97_4740 | DR97_3503 | DR97_4740 | annotation not available | Uncharacterized protein; DUF1289 domain-containing protein | 0.681 |
DR97_3503 | DR97_5551 | DR97_3503 | DR97_5551 | annotation not available | arsC: arsenate reductase | 0.852 |
DR97_3503 | DR97_5807 | DR97_3503 | DR97_5807 | annotation not available | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.735 |
DR97_3503 | rlmN | DR97_3503 | DR97_4063 | annotation not available | 23S rRNA (adenine2503-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity | 0.685 |
DR97_3503 | spuB | DR97_3503 | DR97_3260 | annotation not available | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.765 |
DR97_3503 | spuI | DR97_3503 | DR97_3258 | annotation not available | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.735 |
DR97_3504 | DR97_3503 | DR97_3504 | DR97_3503 | annotation not available | annotation not available | 0.929 |
DR97_369 | DR97_2901 | DR97_369 | DR97_2901 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.605 |
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