Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR97_906 | impA | DR97_906 | DR97_3540 | Conserved hypothetical protein | Peptidase m60-like family protein; Protease that degrades several proteins of the host immune system. Cleaves P-selectin glycoprotein ligand-1 (PSGL-1), leading to its functional inhibition; PSGL-1 is a leukocyte cell-surface receptor essential for leukocyte recruitment to the site of infection. Next to PSGL-1, targets host CD43 and CD44 that are also involved in leukocyte homing. Thus, prevents neutrophil extravasation and thereby protects P.aeruginosa from neutrophil attack. Is also able to inhibit the decay accelerating factor (CD55), but not the cell-surface receptors CD46 and CD31 | 0.488 |
| GltF | GltG | DR97_4747 | DR97_4748 | annotation not available | annotation not available | 0.999 |
| GltF | MtlG | DR97_4747 | DR97_6092 | annotation not available | annotation not available | 0.962 |
| GltF | YhiH | DR97_4747 | DR97_2601 | annotation not available | Putative atp-binding/permease fusion abc transporter; ccmA: heme ABC exporter, ATP-binding protein CcmA | 0.886 |
| GltF | cysA | DR97_4747 | DR97_3242 | annotation not available | Sulfate/thiosulfate transport system atp-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system | 0.628 |
| GltF | impA | DR97_4747 | DR97_3540 | annotation not available | Peptidase m60-like family protein; Protease that degrades several proteins of the host immune system. Cleaves P-selectin glycoprotein ligand-1 (PSGL-1), leading to its functional inhibition; PSGL-1 is a leukocyte cell-surface receptor essential for leukocyte recruitment to the site of infection. Next to PSGL-1, targets host CD43 and CD44 that are also involved in leukocyte homing. Thus, prevents neutrophil extravasation and thereby protects P.aeruginosa from neutrophil attack. Is also able to inhibit the decay accelerating factor (CD55), but not the cell-surface receptors CD46 and CD31 | 0.585 |
| GltF | rbsC | DR97_4747 | DR97_5900 | annotation not available | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family | 0.837 |
| GltG | GltF | DR97_4748 | DR97_4747 | annotation not available | annotation not available | 0.999 |
| GltG | MtlF | DR97_4748 | DR97_6093 | annotation not available | annotation not available | 0.961 |
| GltG | YhiH | DR97_4748 | DR97_2601 | annotation not available | Putative atp-binding/permease fusion abc transporter; ccmA: heme ABC exporter, ATP-binding protein CcmA | 0.928 |
| GltG | cysA | DR97_4748 | DR97_3242 | annotation not available | Sulfate/thiosulfate transport system atp-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system | 0.778 |
| GltG | impA | DR97_4748 | DR97_3540 | annotation not available | Peptidase m60-like family protein; Protease that degrades several proteins of the host immune system. Cleaves P-selectin glycoprotein ligand-1 (PSGL-1), leading to its functional inhibition; PSGL-1 is a leukocyte cell-surface receptor essential for leukocyte recruitment to the site of infection. Next to PSGL-1, targets host CD43 and CD44 that are also involved in leukocyte homing. Thus, prevents neutrophil extravasation and thereby protects P.aeruginosa from neutrophil attack. Is also able to inhibit the decay accelerating factor (CD55), but not the cell-surface receptors CD46 and CD31 | 0.519 |
| GltG | rbsC | DR97_4748 | DR97_5900 | annotation not available | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family | 0.925 |
| MtlF | GltG | DR97_6093 | DR97_4748 | annotation not available | annotation not available | 0.961 |
| MtlF | MtlG | DR97_6093 | DR97_6092 | annotation not available | annotation not available | 0.999 |
| MtlF | YhiH | DR97_6093 | DR97_2601 | annotation not available | Putative atp-binding/permease fusion abc transporter; ccmA: heme ABC exporter, ATP-binding protein CcmA | 0.886 |
| MtlF | impA | DR97_6093 | DR97_3540 | annotation not available | Peptidase m60-like family protein; Protease that degrades several proteins of the host immune system. Cleaves P-selectin glycoprotein ligand-1 (PSGL-1), leading to its functional inhibition; PSGL-1 is a leukocyte cell-surface receptor essential for leukocyte recruitment to the site of infection. Next to PSGL-1, targets host CD43 and CD44 that are also involved in leukocyte homing. Thus, prevents neutrophil extravasation and thereby protects P.aeruginosa from neutrophil attack. Is also able to inhibit the decay accelerating factor (CD55), but not the cell-surface receptors CD46 and CD31 | 0.585 |
| MtlF | rbsC | DR97_6093 | DR97_5900 | annotation not available | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family | 0.850 |
| MtlG | GltF | DR97_6092 | DR97_4747 | annotation not available | annotation not available | 0.962 |
| MtlG | MtlF | DR97_6092 | DR97_6093 | annotation not available | annotation not available | 0.999 |
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