Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DR97_1069 | DR97_355 | Hypothetical protein; DUF2790 domain-containing protein | Polyketide cyclase / dehydrase and lipid transport family protein; May play a role in the interaction of the bacterium with animal cells | 0.428 |
DR97_1069 | DR97_4362 | Hypothetical protein; DUF2790 domain-containing protein | Hypothetical protein; Uncharacterized protein | 0.765 |
DR97_122 | DR97_123 | annotation not available | annotation not available | 0.967 |
DR97_122 | DR97_1513 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.791 |
DR97_122 | DR97_355 | annotation not available | Polyketide cyclase / dehydrase and lipid transport family protein; May play a role in the interaction of the bacterium with animal cells | 0.549 |
DR97_122 | DR97_4585 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.482 |
DR97_123 | DR97_122 | annotation not available | annotation not available | 0.967 |
DR97_123 | DR97_1513 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.783 |
DR97_123 | DR97_355 | annotation not available | Polyketide cyclase / dehydrase and lipid transport family protein; May play a role in the interaction of the bacterium with animal cells | 0.460 |
DR97_123 | DR97_4585 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.482 |
DR97_1513 | DR97_122 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.791 |
DR97_1513 | DR97_123 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.783 |
DR97_1513 | DR97_355 | Hypothetical protein; Uncharacterized protein | Polyketide cyclase / dehydrase and lipid transport family protein; May play a role in the interaction of the bacterium with animal cells | 0.435 |
DR97_1513 | DR97_4585 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; Uncharacterized protein | 0.440 |
DR97_353 | DR97_354 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.938 |
DR97_353 | DR97_355 | Hypothetical protein; Uncharacterized protein | Polyketide cyclase / dehydrase and lipid transport family protein; May play a role in the interaction of the bacterium with animal cells | 0.455 |
DR97_354 | DR97_353 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.938 |
DR97_354 | DR97_355 | annotation not available | Polyketide cyclase / dehydrase and lipid transport family protein; May play a role in the interaction of the bacterium with animal cells | 0.455 |
DR97_355 | DR97_1069 | Polyketide cyclase / dehydrase and lipid transport family protein; May play a role in the interaction of the bacterium with animal cells | Hypothetical protein; DUF2790 domain-containing protein | 0.428 |
DR97_355 | DR97_122 | Polyketide cyclase / dehydrase and lipid transport family protein; May play a role in the interaction of the bacterium with animal cells | annotation not available | 0.549 |
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