Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_4850 | glpE | DR97_4850 | DR97_3558 | annotation not available | Thiosulfate sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide | 0.843 |
PiuB | TauD | DR97_1692 | DR97_6122 | annotation not available | annotation not available | 0.914 |
PiuB | cysH | DR97_1692 | DR97_130 | annotation not available | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite | 0.989 |
PiuB | cysI | DR97_1692 | DR97_41 | annotation not available | annotation not available | 0.999 |
PiuB | glpE | DR97_1692 | DR97_3558 | annotation not available | Thiosulfate sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide | 0.908 |
PiuB | rhdA | DR97_1692 | DR97_2309 | annotation not available | Thiosulfate/3-mercaptopyruvate sulfurtransferase; Catalyzes the sulfur transfer reaction from thiosulfate to cyanide, thus converting cyanide to the less toxic thiocyanate . Contributes to P.aeruginosa survival under cyanogenic conditions, and thus provides the bacterium with a defense mechanism against endogenous cyanide toxicity . Is the main cytoplasmic rhodanese in P.aeruginosa, accounting for 90% of total rhodanese activity | 0.900 |
PiuB | sseA | DR97_1692 | DR97_643 | annotation not available | Thiosulfate/3-mercaptopyruvate sulfurtransferase; Transfers a sulfur ion to cyanide or to other thiol compounds | 0.904 |
PiuB | tauD | DR97_1692 | DR97_3931 | annotation not available | annotation not available | 0.901 |
TauD | PiuB | DR97_6122 | DR97_1692 | annotation not available | annotation not available | 0.914 |
TauD | cysH | DR97_6122 | DR97_130 | annotation not available | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite | 0.900 |
TauD | cysI | DR97_6122 | DR97_41 | annotation not available | annotation not available | 0.901 |
TauD | glpE | DR97_6122 | DR97_3558 | annotation not available | Thiosulfate sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide | 0.900 |
TauD | rhdA | DR97_6122 | DR97_2309 | annotation not available | Thiosulfate/3-mercaptopyruvate sulfurtransferase; Catalyzes the sulfur transfer reaction from thiosulfate to cyanide, thus converting cyanide to the less toxic thiocyanate . Contributes to P.aeruginosa survival under cyanogenic conditions, and thus provides the bacterium with a defense mechanism against endogenous cyanide toxicity . Is the main cytoplasmic rhodanese in P.aeruginosa, accounting for 90% of total rhodanese activity | 0.906 |
TauD | sseA | DR97_6122 | DR97_643 | annotation not available | Thiosulfate/3-mercaptopyruvate sulfurtransferase; Transfers a sulfur ion to cyanide or to other thiol compounds | 0.906 |
TauD | tauD | DR97_6122 | DR97_3931 | annotation not available | annotation not available | 0.836 |
apaG | glpE | DR97_3560 | DR97_3558 | Hypothetical protein; Protein ApaG | Thiosulfate sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide | 0.837 |
cysH | PiuB | DR97_130 | DR97_1692 | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite | annotation not available | 0.989 |
cysH | TauD | DR97_130 | DR97_6122 | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite | annotation not available | 0.900 |
cysH | cysI | DR97_130 | DR97_41 | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite | annotation not available | 0.999 |
cysH | glpE | DR97_130 | DR97_3558 | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite | Thiosulfate sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide | 0.907 |
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