Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1033 | ptrB | DR97_1033 | DR97_3582 | Hypothetical protein; Uncharacterized protein | Uncharacterized protein; C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger , TraR family protein | 0.525 |
DR97_3581 | DR97_3583 | DR97_3581 | DR97_3583 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.436 |
DR97_3581 | ci | DR97_3581 | DR97_3580 | annotation not available | Transcriptional regulator; Represses the promoter activity of the prtN gene | 0.602 |
DR97_3581 | prtN | DR97_3581 | DR97_3579 | annotation not available | Pyocin activator prtn family protein; Activates pyocin genes, probably by binding to the sequences conserved in their 5' non-coding regions (P box) | 0.425 |
DR97_3581 | ptrB | DR97_3581 | DR97_3582 | annotation not available | Uncharacterized protein; C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger , TraR family protein | 0.524 |
DR97_3583 | DR97_3581 | DR97_3583 | DR97_3581 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.436 |
DR97_3583 | ptrB | DR97_3583 | DR97_3582 | Hypothetical protein; Uncharacterized protein | Uncharacterized protein; C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger , TraR family protein | 0.738 |
DR97_3585 | DR97_3594 | DR97_3585 | DR97_3594 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.968 |
DR97_3585 | DR97_3595 | DR97_3585 | DR97_3595 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.935 |
DR97_3585 | DR97_3800 | DR97_3585 | DR97_3800 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.596 |
DR97_3585 | GpU | DR97_3585 | DR97_3596 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.928 |
DR97_3585 | ci | DR97_3585 | DR97_3580 | Hypothetical protein; Uncharacterized protein | Transcriptional regulator; Represses the promoter activity of the prtN gene | 0.476 |
DR97_3585 | prtN | DR97_3585 | DR97_3579 | Hypothetical protein; Uncharacterized protein | Pyocin activator prtn family protein; Activates pyocin genes, probably by binding to the sequences conserved in their 5' non-coding regions (P box) | 0.406 |
DR97_3585 | ptrB | DR97_3585 | DR97_3582 | Hypothetical protein; Uncharacterized protein | Uncharacterized protein; C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger , TraR family protein | 0.593 |
DR97_3594 | DR97_3585 | DR97_3594 | DR97_3585 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.968 |
DR97_3594 | DR97_3595 | DR97_3594 | DR97_3595 | annotation not available | annotation not available | 0.971 |
DR97_3594 | DR97_3800 | DR97_3594 | DR97_3800 | annotation not available | annotation not available | 0.493 |
DR97_3594 | GpU | DR97_3594 | DR97_3596 | annotation not available | annotation not available | 0.955 |
DR97_3594 | ci | DR97_3594 | DR97_3580 | annotation not available | Transcriptional regulator; Represses the promoter activity of the prtN gene | 0.426 |
DR97_3594 | ptrB | DR97_3594 | DR97_3582 | annotation not available | Uncharacterized protein; C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger , TraR family protein | 0.522 |
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