STRINGSTRING
DR97_3620 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_3620" - annotation not available in Pseudomonas aeruginosa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_3620annotation not available (479 aa)    
Predicted Functional Partners:
anmK
Anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family (363 aa)
 
          0.908
znuA
annotation not available (307 aa)
   
        0.737
tyrS
tyrosyl-tRNA synthetase; tyrS- tyrosine--tRNA ligase (399 aa)
              0.683
mltG
Endolytic murein transglycosylase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation (349 aa)
   
 
  0.583
mrcA
PBP_1a_fam- penicillin-binding , 1A family protein (823 aa)
 
 
 
  0.561
amiB3
annotation not available (471 aa)
 
 
  0.532
ctpA
Carboxy-terminal-processing protease; Prc- C-terminal processing peptidase family protein; Belongs to the peptidase S41A family (436 aa)
 
 
 
  0.469
mgtE
Magnesium transporter MgtE; Acts as a magnesium transporter (482 aa)
 
 
 
  0.441
lytM
Glycyl-glycine endopeptidase LytM (299 aa)
   
          0.428
spr
Murein DD-endopeptidase MepH (203 aa)
 
  0.410
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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