Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CtpA | DR97_2734 | DR97_2488 | DR97_2734 | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family | Hypothetical protein; Glycyl-glycine endopeptidase LytM | 0.629 |
CtpA | DR97_3620 | DR97_2488 | DR97_3620 | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family | annotation not available | 0.490 |
CtpA | amiB | DR97_2488 | DR97_2300 | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family | annotation not available | 0.548 |
CtpA | mrcA | DR97_2488 | DR97_2400 | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family | Penicillin-binding , 1a family protein; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) | 0.533 |
DR97_1601 | DR97_3620 | DR97_1601 | DR97_3620 | annotation not available | annotation not available | 0.402 |
DR97_1601 | amiB | DR97_1601 | DR97_2300 | annotation not available | annotation not available | 0.479 |
DR97_1601 | mrcA | DR97_1601 | DR97_2400 | annotation not available | Penicillin-binding , 1a family protein; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) | 0.801 |
DR97_2734 | CtpA | DR97_2734 | DR97_2488 | Hypothetical protein; Glycyl-glycine endopeptidase LytM | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family | 0.629 |
DR97_2734 | DR97_3620 | DR97_2734 | DR97_3620 | Hypothetical protein; Glycyl-glycine endopeptidase LytM | annotation not available | 0.428 |
DR97_3620 | CtpA | DR97_3620 | DR97_2488 | annotation not available | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family | 0.490 |
DR97_3620 | DR97_1601 | DR97_3620 | DR97_1601 | annotation not available | annotation not available | 0.402 |
DR97_3620 | DR97_2734 | DR97_3620 | DR97_2734 | annotation not available | Hypothetical protein; Glycyl-glycine endopeptidase LytM | 0.428 |
DR97_3620 | ZnuA | DR97_3620 | DR97_2876 | annotation not available | annotation not available | 0.751 |
DR97_3620 | amiB | DR97_3620 | DR97_2300 | annotation not available | annotation not available | 0.538 |
DR97_3620 | anmK | DR97_3620 | DR97_3619 | annotation not available | Anhydro-n-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P (By similarity). Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling. Contributes to intrinsic fosfomycin resistance in P.aeruginosa | 0.908 |
DR97_3620 | mrcA | DR97_3620 | DR97_2400 | annotation not available | Penicillin-binding , 1a family protein; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) | 0.538 |
DR97_3620 | rne | DR97_3620 | DR97_4963 | annotation not available | Ribonuclease, rne/rng family domain protein; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs | 0.549 |
DR97_3620 | tyrS | DR97_3620 | DR97_3621 | annotation not available | Tyrosyl-trna synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr) | 0.683 |
ZnuA | DR97_3620 | DR97_2876 | DR97_3620 | annotation not available | annotation not available | 0.751 |
amiB | CtpA | DR97_2300 | DR97_2488 | annotation not available | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family | 0.548 |
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