STRINGSTRING
katA protein (Pseudomonas aeruginosa) - STRING interaction network
"katA" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
katAannotation not available (482 aa)    
Predicted Functional Partners:
tsaA_2
Peroxiredoxin-like protein DDB_G0282517, mitochondrial; C-terminal domain of 1-Cys peroxiredoxin family protein (212 aa)
   
 
  0.942
ahpC
Alkyl hydroperoxide reductase subunit C; ahpC- peroxiredoxin (187 aa)
   
 
  0.937
gor
annotation not available (451 aa)
     
 
  0.923
glcD
Putative FAD-linked oxidoreductase; glcD- glycolate oxidase, subunit GlcD (499 aa)
     
  0.911
glcE
annotation not available (359 aa)
     
  0.911
bsaA
annotation not available (161 aa)
     
 
  0.909
tsaA
Alkyl hydroperoxide reductase; C-terminal domain of 1-Cys peroxiredoxin family protein (200 aa)
   
 
  0.908
kynU
Kynureninase- kynureninase (416 aa)
     
 
    0.904
gpwA
annotation not available (184 aa)
     
 
  0.902
glcF
annotation not available (408 aa)
         
    0.900
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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