STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PchIannotation not available (574 aa)    
Predicted Functional Partners:
pchG
Pyochelin biosynthetic protein PchG; Thiaz-red: thiazolinyl imide reductase family protein
 
  
 0.968
PchH
annotation not available
 
   
0.964
pchF
Pyochelin synthetase; AA-adenyl-dom: amino acid adenylation domain protein
 
  
 0.956
pchE
Dihydroaeruginoic acid synthetase; AA-adenyl-dom: amino acid adenylation domain protein
 
  
 0.943
DR97_3693
Mfs transporter, pat family, beta-lactamase induction signal transducer ampg; Transporter; sider_RhtX_FptX: siderophore transporter, RhtX/FptX family protein
 
  
 0.845
DR97_5029
annotation not available
 
0.779
pchR
Arac family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors; Positive activator of the genes for pyochelin and ferripyochelin receptors
 
  
 0.731
ccmA
Heme abc exporter, atp-binding protein ccma; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system
  
  
 
0.730
BtuC
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
 
  
 0.726
DR97_1640
annotation not available
 
 
0.724
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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