Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DR97_3729 | DR97_3733 | Conserved hypothetical protein | tail_comp_S: phage virion morphogenesis protein | 0.908 |
DR97_3729 | DR97_3737 | Conserved hypothetical protein | Conserved hypothetical protein | 0.774 |
DR97_3729 | DR97_3740 | Conserved hypothetical protein | Conserved hypothetical protein | 0.516 |
DR97_3729 | DR97_3742 | Conserved hypothetical protein | Tape_meas_nterm: tape measure domain protein | 0.609 |
DR97_3729 | DR97_3745 | Conserved hypothetical protein | Conserved hypothetical protein | 0.530 |
DR97_3729 | DR97_3746 | Conserved hypothetical protein | phg_TIGR02218: phage conserved hypothetical BR0599 family protein | 0.509 |
DR97_3729 | DR97_3748 | Conserved hypothetical protein | annotation not available | 0.485 |
DR97_3733 | DR97_3729 | tail_comp_S: phage virion morphogenesis protein | Conserved hypothetical protein | 0.908 |
DR97_3733 | DR97_3737 | tail_comp_S: phage virion morphogenesis protein | Conserved hypothetical protein | 0.823 |
DR97_3733 | DR97_3740 | tail_comp_S: phage virion morphogenesis protein | Conserved hypothetical protein | 0.508 |
DR97_3733 | DR97_3742 | tail_comp_S: phage virion morphogenesis protein | Tape_meas_nterm: tape measure domain protein | 0.821 |
DR97_3733 | DR97_3745 | tail_comp_S: phage virion morphogenesis protein | Conserved hypothetical protein | 0.595 |
DR97_3733 | DR97_3746 | tail_comp_S: phage virion morphogenesis protein | phg_TIGR02218: phage conserved hypothetical BR0599 family protein | 0.590 |
DR97_3733 | DR97_3748 | tail_comp_S: phage virion morphogenesis protein | annotation not available | 0.565 |
DR97_3737 | DR97_3729 | Conserved hypothetical protein | Conserved hypothetical protein | 0.774 |
DR97_3737 | DR97_3733 | Conserved hypothetical protein | tail_comp_S: phage virion morphogenesis protein | 0.823 |
DR97_3737 | DR97_3740 | Conserved hypothetical protein | Conserved hypothetical protein | 0.937 |
DR97_3737 | DR97_3742 | Conserved hypothetical protein | Tape_meas_nterm: tape measure domain protein | 0.918 |
DR97_3737 | DR97_3743 | Conserved hypothetical protein | Conserved hypothetical protein | 0.416 |
DR97_3737 | DR97_3744 | Conserved hypothetical protein | Conserved hypothetical protein | 0.416 |
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