Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2372 | DR97_3252 | DR97_2372 | DR97_3252 | Cyclic di-GMP phosphodiesterase Gmr; GGDEF: diguanylate cyclase domain protein | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | 0.692 |
DR97_2372 | DR97_3759 | DR97_2372 | DR97_3759 | Cyclic di-GMP phosphodiesterase Gmr; GGDEF: diguanylate cyclase domain protein | annotation not available | 0.929 |
DR97_2372 | DR97_3764 | DR97_2372 | DR97_3764 | Cyclic di-GMP phosphodiesterase Gmr; GGDEF: diguanylate cyclase domain protein | Hdig domain-containing protein; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture | 0.555 |
DR97_2372 | DR97_4677 | DR97_2372 | DR97_4677 | Cyclic di-GMP phosphodiesterase Gmr; GGDEF: diguanylate cyclase domain protein | Putative EAL domain/GGDEF domain-containing protein; GGDEF: diguanylate cyclase domain protein | 0.783 |
DR97_2372 | DR97_4759 | DR97_2372 | DR97_4759 | Cyclic di-GMP phosphodiesterase Gmr; GGDEF: diguanylate cyclase domain protein | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | 0.462 |
DR97_2372 | DR97_5178 | DR97_2372 | DR97_5178 | Cyclic di-GMP phosphodiesterase Gmr; GGDEF: diguanylate cyclase domain protein | GGDEF: diguanylate cyclase domain protein | 0.545 |
DR97_2372 | DR97_5603 | DR97_2372 | DR97_5603 | Cyclic di-GMP phosphodiesterase Gmr; GGDEF: diguanylate cyclase domain protein | annotation not available | 0.726 |
DR97_2372 | DR97_830 | DR97_2372 | DR97_830 | Cyclic di-GMP phosphodiesterase Gmr; GGDEF: diguanylate cyclase domain protein | GGDEF: diguanylate cyclase domain protein | 0.478 |
DR97_2372 | fimX | DR97_2372 | DR97_2312 | Cyclic di-GMP phosphodiesterase Gmr; GGDEF: diguanylate cyclase domain protein | GGDEF: diguanylate cyclase domain protein | 0.805 |
DR97_3252 | DR97_2372 | DR97_3252 | DR97_2372 | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | Cyclic di-GMP phosphodiesterase Gmr; GGDEF: diguanylate cyclase domain protein | 0.692 |
DR97_3252 | DR97_3759 | DR97_3252 | DR97_3759 | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | annotation not available | 0.900 |
DR97_3252 | DR97_3764 | DR97_3252 | DR97_3764 | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | Hdig domain-containing protein; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture | 0.628 |
DR97_3252 | DR97_4616 | DR97_3252 | DR97_4616 | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | Putative signaling protein PA3311; GGDEF: diguanylate cyclase domain protein | 0.608 |
DR97_3252 | DR97_4677 | DR97_3252 | DR97_4677 | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | Putative EAL domain/GGDEF domain-containing protein; GGDEF: diguanylate cyclase domain protein | 0.824 |
DR97_3252 | DR97_4759 | DR97_3252 | DR97_4759 | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | 0.507 |
DR97_3252 | DR97_5178 | DR97_3252 | DR97_5178 | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | GGDEF: diguanylate cyclase domain protein | 0.723 |
DR97_3252 | DR97_5603 | DR97_3252 | DR97_5603 | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | annotation not available | 0.951 |
DR97_3252 | DR97_830 | DR97_3252 | DR97_830 | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | GGDEF: diguanylate cyclase domain protein | 0.542 |
DR97_3252 | fimX | DR97_3252 | DR97_2312 | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | GGDEF: diguanylate cyclase domain protein | 0.830 |
DR97_3759 | DR97_2372 | DR97_3759 | DR97_2372 | annotation not available | Cyclic di-GMP phosphodiesterase Gmr; GGDEF: diguanylate cyclase domain protein | 0.929 |
page 1 of 6