STRINGSTRING
oprB_2 protein (Pseudomonas aeruginosa) - STRING interaction network
"oprB_2" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oprB_2annotation not available (434 aa)    
Predicted Functional Partners:
DR97_847
annotation not available (1158 aa)
   
     
  0.844
exuT_2
annotation not available (419 aa)
 
        0.780
hvn
Uncharacterized protein (408 aa)
   
          0.728
DR97_3769
annotation not available (241 aa)
   
        0.717
oprG
annotation not available (232 aa)
           
  0.715
pltD
annotation not available (545 aa)
   
          0.712
DR97_4143
annotation not available (336 aa)
   
          0.698
DR97_849
annotation not available (204 aa)
   
          0.697
DR97_3519
Uncharacterized protein (354 aa)
   
          0.678
DR97_4161
annotation not available (566 aa)
   
          0.672
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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