STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpaChpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component (170 aa)    
Predicted Functional Partners:
hpaB
hpaB-2: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component
 
 
 0.997
bluB
bluB: 5,6-dimethylbenzimidazole synthase
  
 
 0.912
ribF
ribF: riboflavin biosynthesis protein RibF; Belongs to the ribF family
    
  0.908
ribE
ribE: riboflavin synthase, alpha subunit
    
  0.903
DR97_2652
HAD-SF-IA-v1: HAD hydrolase, IA, variant 1 family protein
     
  0.900
hpxO_4
annotation not available
     
 0.859
ssuE
FMN_reduc_SsuE: FMN reductase
    
  0.806
msuE
FMN_reduc_MsuE: FMN reductase
    
  0.806
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
 
    
 0.758
pvcC
Pyoverdine biosynthesis protein; 4-hydroxyphenylacetate 3-hydroxylase C terminal family protein
 
  
 0.686
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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