Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3789 | DR97_5439 | DR97_3789 | DR97_5439 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | Hypothetical protein; Polyketide synthase module-like protein; Thiolase, N-terminal domain protein | 0.834 |
DR97_3789 | DR97_5440 | DR97_3789 | DR97_5440 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | annotation not available | 0.887 |
DR97_3789 | DR97_5444 | DR97_3789 | DR97_5444 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | annotation not available | 0.792 |
DR97_3789 | DR97_5945 | DR97_3789 | DR97_5945 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | annotation not available | 0.802 |
DR97_3789 | DR97_6021 | DR97_3789 | DR97_6021 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | annotation not available | 0.881 |
DR97_3789 | DR97_6022 | DR97_3789 | DR97_6022 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | annotation not available | 0.804 |
DR97_3789 | pchD | DR97_3789 | DR97_3683 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | annotation not available | 0.844 |
DR97_3789 | pcpS | DR97_3789 | DR97_769 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | 4'-phosphopantetheinyl transferase superfamily protein; Belongs to the P-Pant transferase superfamily | 0.877 |
DR97_3789 | phzD1 | DR97_3789 | DR97_3698 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | Trans-2,3-dihydro-3-hydroxyanthranilic acid synthase; Involved in the biosynthesis of the antibiotic phenazine, a nitrogen-containing heterocyclic molecule. PhzD1 (operon phzA1B1C1E1F1G1) has a role in the biosynthesis of the phenazine during planktonic growth . Catalyzes the hydrolysis of the vinyl ether functional group of 2-amino-2-deoxyisochorismate (ADIC), yielding pyruvate and trans-2,3-dihydro-3-hydroxyanthranilic acid (DHHA) . Also able to act on isochorismate, chorismate and 4-amino-4-deoxychorismate (ADC) as substrates | 0.802 |
DR97_3789 | rifR | DR97_3789 | DR97_3682 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | annotation not available | 0.800 |
DR97_5439 | DR97_3789 | DR97_5439 | DR97_3789 | Hypothetical protein; Polyketide synthase module-like protein; Thiolase, N-terminal domain protein | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | 0.834 |
DR97_5439 | DR97_5440 | DR97_5439 | DR97_5440 | Hypothetical protein; Polyketide synthase module-like protein; Thiolase, N-terminal domain protein | annotation not available | 0.840 |
DR97_5439 | DR97_5444 | DR97_5439 | DR97_5444 | Hypothetical protein; Polyketide synthase module-like protein; Thiolase, N-terminal domain protein | annotation not available | 0.986 |
DR97_5439 | DR97_5945 | DR97_5439 | DR97_5945 | Hypothetical protein; Polyketide synthase module-like protein; Thiolase, N-terminal domain protein | annotation not available | 0.423 |
DR97_5439 | DR97_6021 | DR97_5439 | DR97_6021 | Hypothetical protein; Polyketide synthase module-like protein; Thiolase, N-terminal domain protein | annotation not available | 0.631 |
DR97_5439 | DR97_6022 | DR97_5439 | DR97_6022 | Hypothetical protein; Polyketide synthase module-like protein; Thiolase, N-terminal domain protein | annotation not available | 0.778 |
DR97_5439 | pchD | DR97_5439 | DR97_3683 | Hypothetical protein; Polyketide synthase module-like protein; Thiolase, N-terminal domain protein | annotation not available | 0.565 |
DR97_5439 | pcpS | DR97_5439 | DR97_769 | Hypothetical protein; Polyketide synthase module-like protein; Thiolase, N-terminal domain protein | 4'-phosphopantetheinyl transferase superfamily protein; Belongs to the P-Pant transferase superfamily | 0.424 |
DR97_5439 | rifR | DR97_5439 | DR97_3682 | Hypothetical protein; Polyketide synthase module-like protein; Thiolase, N-terminal domain protein | annotation not available | 0.812 |
DR97_5440 | DR97_3789 | DR97_5440 | DR97_3789 | annotation not available | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | 0.887 |
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