STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccoGccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG (471 aa)    
Predicted Functional Partners:
ccoS
ccoS: cytochrome oxidase maturation protein, cbb3-type
 
  
 0.994
FixI
Putative cation-transporting p-type atpase; ATPase-IB1_Cu: copper-translocating P-type ATPase
 
  
 0.976
ccoN1
Cytochrome c oxidase, cbb3-type, subunit i; Belongs to the heme-copper respiratory oxidase family
 
  
 0.975
DR97_386
annotation not available
 
  
 0.969
ccoN2
Cbb3-type putative cytochrome oxidase subunit; Belongs to the heme-copper respiratory oxidase family
 
  
 0.967
DR97_389
annotation not available
 
   
 0.963
CcoN-2
ccoN: cytochrome c oxidase, cbb3-type, subunit I
 
  
 0.950
ccoP1
Cbb3-type putative cytochrome c oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex
 
  
 0.918
ccoO1
ccoO: cytochrome c oxidase, cbb3-type, subunit II
 
  
 0.915
ccoP2
Cbb3-type putative cytochrome c oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex
 
  
 0.888
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.