Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR97_1225 | erpA | DR97_1225 | DR97_3618 | annotation not available | Iron-sulfur cluster assembly accessory family protein; Required for insertion of 4Fe-4S clusters for at least IspG | 0.818 |
| DR97_1225 | lipA | DR97_1225 | DR97_3871 | annotation not available | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | 0.732 |
| DR97_3867 | DR97_3869 | DR97_3867 | DR97_3869 | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | Uncharacterized protein; Belongs to the UPF0250 family | 0.732 |
| DR97_3867 | dacC | DR97_3867 | DR97_3868 | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | 0.972 |
| DR97_3867 | lipA | DR97_3867 | DR97_3871 | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | 0.730 |
| DR97_3867 | lipB | DR97_3867 | DR97_3870 | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate | 0.749 |
| DR97_3869 | DR97_3867 | DR97_3869 | DR97_3867 | Uncharacterized protein; Belongs to the UPF0250 family | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | 0.732 |
| DR97_3869 | dacC | DR97_3869 | DR97_3868 | Uncharacterized protein; Belongs to the UPF0250 family | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | 0.728 |
| DR97_3869 | lipA | DR97_3869 | DR97_3871 | Uncharacterized protein; Belongs to the UPF0250 family | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | 0.874 |
| DR97_3869 | lipB | DR97_3869 | DR97_3870 | Uncharacterized protein; Belongs to the UPF0250 family | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate | 0.892 |
| bioB | lipA | DR97_3468 | DR97_3871 | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | 0.853 |
| dacC | DR97_3867 | DR97_3868 | DR97_3867 | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | 0.972 |
| dacC | DR97_3869 | DR97_3868 | DR97_3869 | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | Uncharacterized protein; Belongs to the UPF0250 family | 0.728 |
| dacC | lipA | DR97_3868 | DR97_3871 | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | 0.773 |
| dacC | lipB | DR97_3868 | DR97_3870 | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate | 0.751 |
| erpA | DR97_1225 | DR97_3618 | DR97_1225 | Iron-sulfur cluster assembly accessory family protein; Required for insertion of 4Fe-4S clusters for at least IspG | annotation not available | 0.818 |
| erpA | lipA | DR97_3618 | DR97_3871 | Iron-sulfur cluster assembly accessory family protein; Required for insertion of 4Fe-4S clusters for at least IspG | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | 0.752 |
| erpA | lipB | DR97_3618 | DR97_3870 | Iron-sulfur cluster assembly accessory family protein; Required for insertion of 4Fe-4S clusters for at least IspG | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate | 0.441 |
| erpA | sucB | DR97_3618 | DR97_303 | Iron-sulfur cluster assembly accessory family protein; Required for insertion of 4Fe-4S clusters for at least IspG | Dihydrolipoyllysine-residue succinyltransferase, e2 component of oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2) | 0.500 |
| lifO | lipA | DR97_5078 | DR97_3871 | Proteobacterial lipase chaperone family protein; May be involved in the folding of the extracellular lipase during its passage through the periplasm | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | 0.786 |
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