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STRINGSTRING
DR97_3875 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_3875" - Domain of unknown function family protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_3875Domain of unknown function family protein (50 aa)    
Predicted Functional Partners:
DR97_4674
annotation not available (103 aa)
   
          0.738
DR97_5138
Chromosome partitioning protein ParA (87 aa)
   
          0.733
DR97_539
annotation not available (138 aa)
   
          0.732
DR97_4033
DNA polymerase III subunit chi (122 aa)
   
          0.712
DR97_2640
Uncharacterized protein (91 aa)
   
          0.708
DR97_2314
annotation not available (508 aa)
   
          0.707
DR97_3018
annotation not available (145 aa)
   
          0.699
DR97_3806
Uncharacterized protein (118 aa)
   
          0.690
DR97_3879
Uncharacterized protein (143 aa)
 
          0.684
DR97_4675
Uncharacterized protein (119 aa)
   
          0.681
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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