Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3882 | DR97_3884 | DR97_3882 | DR97_3884 | annotation not available | annotation not available | 0.954 |
DR97_3882 | lnt | DR97_3882 | DR97_3881 | annotation not available | Apolipoprotein n-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation | 0.796 |
DR97_3882 | miaB | DR97_3882 | DR97_3885 | annotation not available | TRNA-2-methylthio-N6-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine | 0.653 |
DR97_3882 | ybeY | DR97_3882 | DR97_3883 | annotation not available | Putative rrna maturation factor ybey; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA | 0.963 |
DR97_3884 | DR97_3882 | DR97_3884 | DR97_3882 | annotation not available | annotation not available | 0.954 |
DR97_3884 | DR97_4703 | DR97_3884 | DR97_4703 | annotation not available | annotation not available | 0.857 |
DR97_3884 | MazG | DR97_3884 | DR97_1004 | annotation not available | Nucleoside triphosphate pyrophosphohydrolase; mazG: MazG family protein | 0.754 |
DR97_3884 | dacC | DR97_3884 | DR97_3868 | annotation not available | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | 0.775 |
DR97_3884 | era | DR97_3884 | DR97_1212 | annotation not available | Gtp-binding protein era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism | 0.757 |
DR97_3884 | lnt | DR97_3884 | DR97_3881 | annotation not available | Apolipoprotein n-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation | 0.883 |
DR97_3884 | miaB | DR97_3884 | DR97_3885 | annotation not available | TRNA-2-methylthio-N6-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine | 0.741 |
DR97_3884 | mrdA | DR97_3884 | DR97_3864 | annotation not available | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall | 0.755 |
DR97_3884 | mrdB | DR97_3884 | DR97_3865 | annotation not available | Rod shape determining protein roda; Peptidoglycan polymerase that is essential for cell wall elongation | 0.746 |
DR97_3884 | ybeY | DR97_3884 | DR97_3883 | annotation not available | Putative rrna maturation factor ybey; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA | 0.999 |
DR97_4703 | DR97_3884 | DR97_4703 | DR97_3884 | annotation not available | annotation not available | 0.857 |
MazG | DR97_3884 | DR97_1004 | DR97_3884 | Nucleoside triphosphate pyrophosphohydrolase; mazG: MazG family protein | annotation not available | 0.754 |
MazG | dacC | DR97_1004 | DR97_3868 | Nucleoside triphosphate pyrophosphohydrolase; mazG: MazG family protein | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | 0.404 |
MazG | era | DR97_1004 | DR97_1212 | Nucleoside triphosphate pyrophosphohydrolase; mazG: MazG family protein | Gtp-binding protein era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism | 0.959 |
dacC | DR97_3884 | DR97_3868 | DR97_3884 | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | annotation not available | 0.775 |
dacC | MazG | DR97_3868 | DR97_1004 | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | Nucleoside triphosphate pyrophosphohydrolase; mazG: MazG family protein | 0.404 |
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