STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CepABelongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family (298 aa)    
Predicted Functional Partners:
DR97_3904
annotation not available
       0.721
oadA
oadA: oxaloacetate decarboxylase alpha subunit
      
 0.672
DR97_1646
annotation not available
  
  
 0.656
hrpB
DEAH_box_HrpB: ATP-dependent helicase HrpB
  
   0.654
hldE
D-beta-d-heptose 7-phosphate kinase / d-beta-d-heptose 1-phosphate adenosyltransferase; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7- phosphate at the C-1 position to selectively form D-glycero-beta-D- manno-heptose-1,7-bisphosphate
 
  
 0.647
cmaX
annotation not available
 
   
 0.626
mntH1
Metal ion transporter, metal ion family protein; H(+)-stimulated, divalent metal cation uptake system
  
 
 0.620
DR97_497
Uncharacterized protein; CDF: cation diffusion facilitator transporter family protein
  
 
 0.614
mntH2
Metal ion transporter, metal ion family protein; H(+)-stimulated, divalent metal cation uptake system
   
 
 0.609
ptsN
Pts iia-like nitrogen-regulatory protein ptsn; Seems to have a role in regulating nitrogen assimilation
      
 0.577
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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