STRINGSTRING
DR97_3909 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_3909" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_3909annotation not available (278 aa)    
Predicted Functional Partners:
DR97_3907
annotation not available (244 aa)
 
          0.772
DR97_3908
annotation not available (379 aa)
   
        0.622
DR97_3236
Uncharacterized protein (256 aa)
   
          0.604
DR97_2678
annotation not available (855 aa)
   
          0.602
DR97_294
Biotin ligase C terminal domain protein (410 aa)
   
          0.526
pilX
Type 4 fimbrial biogenesis protein PilX; pilX N-terminal family protein (195 aa)
   
          0.526
DR97_985
Uncharacterized protein (127 aa)
   
          0.516
DR97_121
annotation not available (395 aa)
   
        0.488
DR97_2013
annotation not available (412 aa)
   
        0.455
DR97_1501
Uncharacterized protein (118 aa)
   
          0.447
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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