Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CheY | DR97_159 | DR97_3135 | DR97_159 | annotation not available | annotation not available | 0.527 |
CheY | DR97_3066 | DR97_3135 | DR97_3066 | annotation not available | Hypothetical protein; Twin transmembrane helix small protein | 0.514 |
CheY | DR97_3921 | DR97_3135 | DR97_3921 | annotation not available | annotation not available | 0.526 |
CheY | bpt | DR97_3135 | DR97_5344 | annotation not available | Leucyl-trna---protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate | 0.501 |
CheY | coIII | DR97_3135 | DR97_3065 | annotation not available | annotation not available | 0.442 |
CheY | coxB | DR97_3135 | DR97_3062 | annotation not available | Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) | 0.521 |
DR97_159 | CheY | DR97_159 | DR97_3135 | annotation not available | annotation not available | 0.527 |
DR97_159 | DR97_3066 | DR97_159 | DR97_3066 | annotation not available | Hypothetical protein; Twin transmembrane helix small protein | 0.526 |
DR97_159 | DR97_3921 | DR97_159 | DR97_3921 | annotation not available | annotation not available | 0.527 |
DR97_159 | bpt | DR97_159 | DR97_5344 | annotation not available | Leucyl-trna---protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate | 0.528 |
DR97_3066 | CheY | DR97_3066 | DR97_3135 | Hypothetical protein; Twin transmembrane helix small protein | annotation not available | 0.514 |
DR97_3066 | DR97_159 | DR97_3066 | DR97_159 | Hypothetical protein; Twin transmembrane helix small protein | annotation not available | 0.526 |
DR97_3066 | DR97_3921 | DR97_3066 | DR97_3921 | Hypothetical protein; Twin transmembrane helix small protein | annotation not available | 0.544 |
DR97_3066 | bpt | DR97_3066 | DR97_5344 | Hypothetical protein; Twin transmembrane helix small protein | Leucyl-trna---protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate | 0.597 |
DR97_3066 | coIII | DR97_3066 | DR97_3065 | Hypothetical protein; Twin transmembrane helix small protein | annotation not available | 0.673 |
DR97_3066 | coxB | DR97_3066 | DR97_3062 | Hypothetical protein; Twin transmembrane helix small protein | Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) | 0.681 |
DR97_3921 | CheY | DR97_3921 | DR97_3135 | annotation not available | annotation not available | 0.526 |
DR97_3921 | DR97_159 | DR97_3921 | DR97_159 | annotation not available | annotation not available | 0.527 |
DR97_3921 | DR97_3066 | DR97_3921 | DR97_3066 | annotation not available | Hypothetical protein; Twin transmembrane helix small protein | 0.544 |
DR97_3921 | DR97_3922 | DR97_3921 | DR97_3922 | annotation not available | Acetyltransferase family protein; Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to an acceptor substrate and releases both CoA and the acetylated product. It prefers the peptide Asp-Phe methyl ester (or aspartame) and the peptide antibiotics polymyxin B and colistin. Other substrates like dopamine, serotonin, puromycin, chloramphenicol, D- glucosamine, glycine and N-alpha-acetyl-L-glutamine are used and displayed lower activity | 0.768 |
page 1 of 3