Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_493 | FecI | DR97_493 | DR97_3967 | annotation not available | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.873 |
DR97_493 | FecR | DR97_493 | DR97_3966 | annotation not available | annotation not available | 0.499 |
DR97_493 | FiuI | DR97_493 | DR97_3440 | annotation not available | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.853 |
DR97_493 | FiuR | DR97_493 | DR97_3439 | annotation not available | annotation not available | 0.659 |
DR97_493 | fecA | DR97_493 | DR97_3965 | annotation not available | annotation not available | 0.479 |
DR97_493 | femR | DR97_493 | DR97_5935 | annotation not available | annotation not available | 0.592 |
DR97_493 | foxR | DR97_493 | DR97_5707 | annotation not available | annotation not available | 0.620 |
FecA | FecI | DR97_4663 | DR97_3967 | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.887 |
FecA | FecR | DR97_4663 | DR97_3966 | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.943 |
FecA | FiuI | DR97_4663 | DR97_3440 | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.774 |
FecA | FiuR | DR97_4663 | DR97_3439 | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.805 |
FecA | femR | DR97_4663 | DR97_5935 | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.447 |
FecA | foxR | DR97_4663 | DR97_5707 | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.562 |
FecA | piuC | DR97_4663 | DR97_1694 | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.680 |
FecI | DR97_493 | DR97_3967 | DR97_493 | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | annotation not available | 0.873 |
FecI | FecA | DR97_3967 | DR97_4663 | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.887 |
FecI | FecR | DR97_3967 | DR97_3966 | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | annotation not available | 0.998 |
FecI | FiuI | DR97_3967 | DR97_3440 | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.910 |
FecI | FiuR | DR97_3967 | DR97_3439 | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | annotation not available | 0.954 |
FecI | PirR | DR97_3967 | DR97_1010 | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | Two-component system, ompr family, response regulator pfer; Transcriptional regulatory , C terminal family protein | 0.892 |
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