Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CdsA | PgsA | DR97_5635 | DR97_5630 | annotation not available | annotation not available | 0.995 |
CdsA | cdsA | DR97_5635 | DR97_4288 | annotation not available | annotation not available | 0.841 |
CdsA | pcs | DR97_5635 | DR97_4009 | annotation not available | Cdp-alcohol phosphatidyltransferase family protein; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP | 0.921 |
CdsA | pgsA | DR97_5635 | DR97_5461 | annotation not available | CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family | 0.934 |
CdsA | pssA | DR97_5635 | DR97_2035 | annotation not available | Cdp-diacylglycerol---serine o-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family | 0.921 |
DR97_3094 | pcs | DR97_3094 | DR97_4009 | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family | Cdp-alcohol phosphatidyltransferase family protein; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP | 0.672 |
PgsA | CdsA | DR97_5630 | DR97_5635 | annotation not available | annotation not available | 0.995 |
PgsA | cdsA | DR97_5630 | DR97_4288 | annotation not available | annotation not available | 0.953 |
PgsA | pcs | DR97_5630 | DR97_4009 | annotation not available | Cdp-alcohol phosphatidyltransferase family protein; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP | 0.916 |
PgsA | pgsA | DR97_5630 | DR97_5461 | annotation not available | CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family | 0.809 |
PgsA | pssA | DR97_5630 | DR97_2035 | annotation not available | Cdp-diacylglycerol---serine o-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family | 0.916 |
cdsA | CdsA | DR97_4288 | DR97_5635 | annotation not available | annotation not available | 0.841 |
cdsA | PgsA | DR97_4288 | DR97_5630 | annotation not available | annotation not available | 0.953 |
cdsA | pcs | DR97_4288 | DR97_4009 | annotation not available | Cdp-alcohol phosphatidyltransferase family protein; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP | 0.928 |
cdsA | pgsA | DR97_4288 | DR97_5461 | annotation not available | CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family | 0.971 |
cdsA | pssA | DR97_4288 | DR97_2035 | annotation not available | Cdp-diacylglycerol---serine o-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family | 0.936 |
choV | pcs | DR97_2752 | DR97_4009 | Putative glycine betaine/l-proline abc transporter, atp-binding subunit; ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein | Cdp-alcohol phosphatidyltransferase family protein; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP | 0.697 |
pcs | CdsA | DR97_4009 | DR97_5635 | Cdp-alcohol phosphatidyltransferase family protein; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP | annotation not available | 0.921 |
pcs | DR97_3094 | DR97_4009 | DR97_3094 | Cdp-alcohol phosphatidyltransferase family protein; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family | 0.672 |
pcs | PgsA | DR97_4009 | DR97_5630 | Cdp-alcohol phosphatidyltransferase family protein; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP | annotation not available | 0.916 |
page 1 of 3