STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcsCdp-alcohol phosphatidyltransferase family protein; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP (232 aa)    
Predicted Functional Partners:
cdsA
annotation not available
  
 
 0.928
CdsA
annotation not available
  
 
 0.921
plcH
Phospholipase c, phosphocholine-specific; Hydrolyzes sphingomyelin in addition to phosphatidylcholine
     
 0.916
pgsA
CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family
  
 
 0.916
PgsA
annotation not available
  
 
 0.916
plcN
Phospholipase c, phosphocholine-specific; Hydrolyzes phosphatidylserine as well as phosphatidylcholine
     
 0.905
pssA
Cdp-diacylglycerol---serine o-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family
     
 0.904
pmtA
annotation not available
      
 0.855
choV
Putative glycine betaine/l-proline abc transporter, atp-binding subunit; ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein
      
 0.697
DR97_3094
Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family
      0.672
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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