Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CumA | CumB | DR97_4107 | DR97_4108 | annotation not available | Cytidine and deoxycytidylate deaminase zinc-binding region family protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) | 0.784 |
CumA | DR97_1549 | DR97_4107 | DR97_1549 | annotation not available | annotation not available | 0.557 |
CumA | DR97_1550 | DR97_4107 | DR97_1550 | annotation not available | Uncharacterized protein | 0.558 |
CumA | DR97_1992 | DR97_4107 | DR97_1992 | annotation not available | annotation not available | 0.546 |
CumA | DR97_2618 | DR97_4107 | DR97_2618 | annotation not available | annotation not available | 0.955 |
CumA | DR97_4106 | DR97_4107 | DR97_4106 | annotation not available | annotation not available | 0.504 |
CumA | copB | DR97_4107 | DR97_5782 | annotation not available | annotation not available | 0.680 |
CumA | copC | DR97_4107 | DR97_5473 | annotation not available | annotation not available | 0.510 |
CumA | copR | DR97_4107 | DR97_5134 | annotation not available | annotation not available | 0.528 |
CumA | copS | DR97_4107 | DR97_5133 | annotation not available | Two-component system, ompr family, heavy metal sensor histidine kinase cuss; Member of a two-component regulatory system | 0.650 |
CumB | CumA | DR97_4108 | DR97_4107 | Cytidine and deoxycytidylate deaminase zinc-binding region family protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) | annotation not available | 0.784 |
CumB | DR97_4106 | DR97_4108 | DR97_4106 | Cytidine and deoxycytidylate deaminase zinc-binding region family protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) | annotation not available | 0.425 |
DR97_1549 | CumA | DR97_1549 | DR97_4107 | annotation not available | annotation not available | 0.557 |
DR97_1549 | DR97_1550 | DR97_1549 | DR97_1550 | annotation not available | Uncharacterized protein | 0.976 |
DR97_1550 | CumA | DR97_1550 | DR97_4107 | Uncharacterized protein | annotation not available | 0.558 |
DR97_1550 | DR97_1549 | DR97_1550 | DR97_1549 | Uncharacterized protein | annotation not available | 0.976 |
DR97_1992 | CumA | DR97_1992 | DR97_4107 | annotation not available | annotation not available | 0.546 |
DR97_2618 | CumA | DR97_2618 | DR97_4107 | annotation not available | annotation not available | 0.955 |
DR97_4106 | CumA | DR97_4106 | DR97_4107 | annotation not available | annotation not available | 0.504 |
DR97_4106 | CumB | DR97_4106 | DR97_4108 | annotation not available | Cytidine and deoxycytidylate deaminase zinc-binding region family protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) | 0.425 |
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