STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_4148annotation not available (213 aa)    
Predicted Functional Partners:
DR97_4149
Hypothetical protein; Uncharacterized protein
 
    0.958
DR97_4150
annotation not available
 
    0.920
DR97_4146
Uncharacterized protein; Conserved hypothetical protein
 
     0.895
DR97_4147
annotation not available
 
    0.893
DR97_4151
annotation not available
 
    0.832
DR97_5232
annotation not available
  
     0.667
DR97_3519
Hypothetical protein; Uncharacterized protein
  
     0.620
tsi7
Hypothetical protein; Immunity protein that plays a role in preventing early activation of toxin Tse7. Protects thereby cells from Tse7 DNase activity
  
     0.552
DR97_2899
Hypothetical protein; Uncharacterized protein
  
     0.542
tse7
Ghh signature containing hnh/endo vii supernuclease toxin 2 family protein; Type VI secretion exported toxin that via to its DNase activity induces growth arrest and ultimately DNA degradation within target cell . The activity is initially neutralized by a cognate immunity protein Tsi7
  
     0.480
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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