STRINGSTRING
DR97_4186 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_4186" - Lipoprotein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_4186Lipoprotein (134 aa)    
Predicted Functional Partners:
lptF
annotation not available (261 aa)
 
        0.947
DR97_6256
Putative membrane protein; phospholipase_D-nuclease N-terminal family protein (69 aa)
   
          0.584
DR97_2358
annotation not available (298 aa)
   
          0.567
DR97_5175
Uncharacterized protein (163 aa)
   
          0.535
DR97_5
Uncharacterized protein (141 aa)
   
          0.534
wapP
annotation not available (244 aa)
   
          0.533
DR97_2347
Metal ABC transporter ATPase (306 aa)
   
          0.528
DR97_3272
Uncharacterized protein (250 aa)
   
          0.527
DR97_6029
Uncharacterized protein; Putative pA2404 (179 aa)
   
          0.517
DR97_2357
annotation not available (472 aa)
   
          0.515
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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