Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3467 | DR97_4214 | DR97_3467 | DR97_4214 | Hypothetical protein; Pili assembly chaperone PapD, C-terminal domain protein | annotation not available | 0.512 |
DR97_3467 | DR97_955 | DR97_3467 | DR97_955 | Hypothetical protein; Pili assembly chaperone PapD, C-terminal domain protein | annotation not available | 0.804 |
DR97_3467 | cupC3 | DR97_3467 | DR97_953 | Hypothetical protein; Pili assembly chaperone PapD, C-terminal domain protein | Outer membrane usher protein; Usher CupC3; papC N-terminal domain protein | 0.849 |
DR97_4212 | DR97_4213 | DR97_4212 | DR97_4213 | annotation not available | Transcriptional regulator, spx/mgsr family protein; Belongs to the ArsC family | 0.890 |
DR97_4212 | DR97_4214 | DR97_4212 | DR97_4214 | annotation not available | annotation not available | 0.630 |
DR97_4212 | dapD | DR97_4212 | DR97_4211 | annotation not available | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA (By similarity). Displays succinyl transferase activity with L-2-aminopimelate and succinyl-CoA as substrates | 0.775 |
DR97_4213 | DR97_4212 | DR97_4213 | DR97_4212 | Transcriptional regulator, spx/mgsr family protein; Belongs to the ArsC family | annotation not available | 0.890 |
DR97_4213 | DR97_4214 | DR97_4213 | DR97_4214 | Transcriptional regulator, spx/mgsr family protein; Belongs to the ArsC family | annotation not available | 0.643 |
DR97_4213 | dapD | DR97_4213 | DR97_4211 | Transcriptional regulator, spx/mgsr family protein; Belongs to the ArsC family | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA (By similarity). Displays succinyl transferase activity with L-2-aminopimelate and succinyl-CoA as substrates | 0.823 |
DR97_4214 | DR97_3467 | DR97_4214 | DR97_3467 | annotation not available | Hypothetical protein; Pili assembly chaperone PapD, C-terminal domain protein | 0.512 |
DR97_4214 | DR97_4212 | DR97_4214 | DR97_4212 | annotation not available | annotation not available | 0.630 |
DR97_4214 | DR97_4213 | DR97_4214 | DR97_4213 | annotation not available | Transcriptional regulator, spx/mgsr family protein; Belongs to the ArsC family | 0.643 |
DR97_4214 | DR97_955 | DR97_4214 | DR97_955 | annotation not available | annotation not available | 0.577 |
DR97_4214 | cupB4 | DR97_4214 | DR97_3784 | annotation not available | Chaperone protein EcpD; Pili assembly chaperone PapD, C-terminal domain protein | 0.534 |
DR97_4214 | cupC2 | DR97_4214 | DR97_954 | annotation not available | Hypothetical protein; Chaperone protein EcpD; Pili assembly chaperone PapD, C-terminal domain protein | 0.506 |
DR97_4214 | cupC3 | DR97_4214 | DR97_953 | annotation not available | Outer membrane usher protein; Usher CupC3; papC N-terminal domain protein | 0.559 |
DR97_4214 | dapD | DR97_4214 | DR97_4211 | annotation not available | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA (By similarity). Displays succinyl transferase activity with L-2-aminopimelate and succinyl-CoA as substrates | 0.573 |
DR97_4214 | imm | DR97_4214 | DR97_4375 | annotation not available | annotation not available | 0.526 |
DR97_4214 | imm1 | DR97_4214 | DR97_783 | annotation not available | pyocin-S1 immunity protein; Belongs to the colicins ColE2/ColE8/ColE9 and pyocins S1/S2 family | 0.521 |
DR97_955 | DR97_3467 | DR97_955 | DR97_3467 | annotation not available | Hypothetical protein; Pili assembly chaperone PapD, C-terminal domain protein | 0.804 |
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