STRINGSTRING
PACL_0706 protein (Pseudomonas aeruginosa) - STRING interaction network
"PACL_0706" - Uncharacterized protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PACL_0706Uncharacterized protein (247 aa)    
Predicted Functional Partners:
A
annotation not available (659 aa)
 
          0.800
DR97_4252
annotation not available (164 aa)
 
          0.727
DR97_4255
Portal_lambda- phage portal protein, lambda family (548 aa)
 
          0.715
DR97_4250
annotation not available (65 aa)
              0.671
DR97_4256
annotation not available (693 aa)
 
          0.640
DR97_5362
Conserved hypothetical protein (787 aa)
   
          0.584
DR97_1094
annotation not available (139 aa)
   
          0.569
DR97_5371
Conserved hypothetical protein (580 aa)
   
          0.532
DR97_95
annotation not available (443 aa)
   
          0.515
DR97_4706
DUF2790 domain-containing protein (88 aa)
   
          0.513
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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