STRINGSTRING
yjcE protein (Pseudomonas aeruginosa) - STRING interaction network
"yjcE" - Putative Na(+)/H(+) exchanger yjcE in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjcEPutative Na(+)/H(+) exchanger yjcE; A_cpa1- Na+/H+ antiporter (553 aa)    
Predicted Functional Partners:
gpuP
3-guanidinopropionate transporter; Sodium-solute symporter family protein; Belongs to the sodium-solute symporter (SSF) (TC 2.A.21) family (461 aa)
           
  0.617
DR97_4137
annotation not available (611 aa)
         
  0.530
minD_2
Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (364 aa)
         
  0.513
tniB
annotation not available (302 aa)
   
   
  0.473
cvrA
K(+)/H(+) antiporter NhaP2; K(+)/H(+) antiporter that extrudes potassium in exchange for external protons and maintains the internal concentration of potassium under toxic levels (580 aa)
     
   
  0.464
trkH
Trk system potassium uptake protein; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA (484 aa)
   
 
  0.463
soxD
annotation not available (106 aa)
           
  0.439
fruA
FRU- PTS system, Fru family, IIB component domain protein (585 aa)
     
      0.425
kefB
Glutathione-regulated potassium-efflux system protein KefB; 2a37- transporter, monovalent cation-proton antiporter-2 family protein (613 aa)
     
 
  0.402
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
Server load: low (11%) [HD]