Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1181 | DR97_429 | DR97_1181 | DR97_429 | annotation not available | Siderophore receptor; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.407 |
DR97_1181 | fptA | DR97_1181 | DR97_3690 | annotation not available | Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid; High-affinity outer membrane receptor required for the transport of Fe(3+)-pyochelin | 0.589 |
DR97_1423 | DR97_429 | DR97_1423 | DR97_429 | Periplasmic protein tonb; Uncharacterized protein; tonB_Cterm: TonB family C-terminal domain protein | Siderophore receptor; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.404 |
DR97_2772 | DR97_2773 | DR97_2772 | DR97_2773 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.964 |
DR97_2772 | DR97_429 | DR97_2772 | DR97_429 | annotation not available | Siderophore receptor; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.523 |
DR97_2773 | DR97_2772 | DR97_2773 | DR97_2772 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.964 |
DR97_2773 | DR97_429 | DR97_2773 | DR97_429 | Hypothetical protein; Uncharacterized protein | Siderophore receptor; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.523 |
DR97_429 | DR97_1181 | DR97_429 | DR97_1181 | Siderophore receptor; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.407 |
DR97_429 | DR97_1423 | DR97_429 | DR97_1423 | Siderophore receptor; tonB-siderophor: TonB-dependent siderophore receptor family protein | Periplasmic protein tonb; Uncharacterized protein; tonB_Cterm: TonB family C-terminal domain protein | 0.404 |
DR97_429 | DR97_2772 | DR97_429 | DR97_2772 | Siderophore receptor; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.523 |
DR97_429 | DR97_2773 | DR97_429 | DR97_2773 | Siderophore receptor; tonB-siderophor: TonB-dependent siderophore receptor family protein | Hypothetical protein; Uncharacterized protein | 0.523 |
DR97_429 | DR97_430 | DR97_429 | DR97_430 | Siderophore receptor; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.732 |
DR97_429 | DR97_431 | DR97_429 | DR97_431 | Siderophore receptor; tonB-siderophor: TonB-dependent siderophore receptor family protein | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.739 |
DR97_429 | FecA | DR97_429 | DR97_4663 | Siderophore receptor; tonB-siderophor: TonB-dependent siderophore receptor family protein | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.812 |
DR97_429 | cntO | DR97_429 | DR97_2187 | Siderophore receptor; tonB-siderophor: TonB-dependent siderophore receptor family protein | Tonb-dependent siderophore receptor family protein; Transports the metallophore pseudopaline, which is involved in the acquisition of nickel and zinc, and thus enables bacterial growth inside the host, where metal access is limited. Is probably involved in the import of pseudopaline-metal complexes | 0.419 |
DR97_429 | fecA | DR97_429 | DR97_3965 | Siderophore receptor; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.421 |
DR97_429 | fptA | DR97_429 | DR97_3690 | Siderophore receptor; tonB-siderophor: TonB-dependent siderophore receptor family protein | Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid; High-affinity outer membrane receptor required for the transport of Fe(3+)-pyochelin | 0.487 |
DR97_430 | DR97_429 | DR97_430 | DR97_429 | annotation not available | Siderophore receptor; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.732 |
DR97_430 | DR97_431 | DR97_430 | DR97_431 | annotation not available | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.990 |
DR97_430 | FecA | DR97_430 | DR97_4663 | annotation not available | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.456 |
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