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yaaJ protein (Pseudomonas aeruginosa) - STRING interaction network
"yaaJ" - agcS: amino acid carrier family protein in Pseudomonas aeruginosa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yaaJagcS- amino acid carrier family protein (471 aa)    
Predicted Functional Partners:
aotM
Octopine transport system permease protein OccM; HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein (232 aa)
           
  0.720
gltA
cit_synth_I- citrate (Si)-synthase; Belongs to the citrate synthase family (428 aa)
     
   
  0.716
prpC
cit_synth_II- 2-methylcitrate synthase/citrate synthase II family protein; Belongs to the citrate synthase family (375 aa)
     
        0.711
pnaS
2a58- sodium-dependent inorganic phosphate (Pi) transporter family protein (582 aa)
         
  0.632
nqrB
Na(+)-translocating NADH-quinone reductase subunit B; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol (403 aa)
           
  0.630
putP
na_Pro_sym- sodium/proline symporter; Belongs to the sodium-solute symporter (SSF) (TC 2.A.21) family (506 aa)
   
   
  0.577
dnaE_2
Polc- DNA polymerase III, alpha subunit (1173 aa)
              0.540
sdh
annotation not available (253 aa)
   
   
  0.536
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (201 aa)
   
        0.496
astD
N-succinylglutamate 5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate (487 aa)
     
   
  0.490
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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