Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rplM | rpmB | DR97_1611 | DR97_2687 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Large subunit ribosomal protein l28; Belongs to the bacterial ribosomal protein bL28 family | 0.999 |
| rplM | rpmE2 | DR97_1611 | DR97_4338 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Large subunit ribosomal protein l31; L31: ribosomal protein L31 | 0.936 |
| rplM | rpmG | DR97_1611 | DR97_2686 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Large subunit ribosomal protein l33; Belongs to the bacterial ribosomal protein bL33 family | 0.999 |
| rplM | rpmI | DR97_1611 | DR97_5220 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Large subunit ribosomal protein l35; Belongs to the bacterial ribosomal protein bL35 family | 0.998 |
| rplM | rpmJ | DR97_1611 | DR97_3669 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Large subunit ribosomal protein l36; Belongs to the bacterial ribosomal protein bL36 family | 0.995 |
| rplM | rpmJ2 | DR97_1611 | DR97_4339 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Large subunit ribosomal protein l36; Belongs to the bacterial ribosomal protein bL36 family | 0.979 |
| rplM | rpsN | DR97_1611 | DR97_3661 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Small subunit ribosomal protein s14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site | 0.999 |
| rplM | rpsP | DR97_1611 | DR97_4131 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Small subunit ribosomal protein s16; Belongs to the bacterial ribosomal protein bS16 family | 0.999 |
| rplM | rpsR | DR97_1611 | DR97_2285 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Small subunit ribosomal protein s18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit | 0.999 |
| rplM | rpsT | DR97_1611 | DR97_1867 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Small subunit ribosomal protein s20; Binds directly to 16S ribosomal RNA | 0.998 |
| rpmB | rplM | DR97_2687 | DR97_1611 | Large subunit ribosomal protein l28; Belongs to the bacterial ribosomal protein bL28 family | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | 0.999 |
| rpmB | rpmE2 | DR97_2687 | DR97_4338 | Large subunit ribosomal protein l28; Belongs to the bacterial ribosomal protein bL28 family | Large subunit ribosomal protein l31; L31: ribosomal protein L31 | 0.986 |
| rpmB | rpmG | DR97_2687 | DR97_2686 | Large subunit ribosomal protein l28; Belongs to the bacterial ribosomal protein bL28 family | Large subunit ribosomal protein l33; Belongs to the bacterial ribosomal protein bL33 family | 0.999 |
| rpmB | rpmI | DR97_2687 | DR97_5220 | Large subunit ribosomal protein l28; Belongs to the bacterial ribosomal protein bL28 family | Large subunit ribosomal protein l35; Belongs to the bacterial ribosomal protein bL35 family | 0.999 |
| rpmB | rpmJ | DR97_2687 | DR97_3669 | Large subunit ribosomal protein l28; Belongs to the bacterial ribosomal protein bL28 family | Large subunit ribosomal protein l36; Belongs to the bacterial ribosomal protein bL36 family | 0.993 |
| rpmB | rpmJ2 | DR97_2687 | DR97_4339 | Large subunit ribosomal protein l28; Belongs to the bacterial ribosomal protein bL28 family | Large subunit ribosomal protein l36; Belongs to the bacterial ribosomal protein bL36 family | 0.952 |
| rpmB | rpsN | DR97_2687 | DR97_3661 | Large subunit ribosomal protein l28; Belongs to the bacterial ribosomal protein bL28 family | Small subunit ribosomal protein s14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site | 0.999 |
| rpmB | rpsP | DR97_2687 | DR97_4131 | Large subunit ribosomal protein l28; Belongs to the bacterial ribosomal protein bL28 family | Small subunit ribosomal protein s16; Belongs to the bacterial ribosomal protein bS16 family | 0.998 |
| rpmB | rpsR | DR97_2687 | DR97_2285 | Large subunit ribosomal protein l28; Belongs to the bacterial ribosomal protein bL28 family | Small subunit ribosomal protein s18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit | 0.999 |
| rpmB | rpsT | DR97_2687 | DR97_1867 | Large subunit ribosomal protein l28; Belongs to the bacterial ribosomal protein bL28 family | Small subunit ribosomal protein s20; Binds directly to 16S ribosomal RNA | 0.999 |
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