Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
UspA | eddB | DR97_97 | DR97_3957 | annotation not available | annotation not available | 0.534 |
UspA | phoA2 | DR97_97 | DR97_1431 | annotation not available | Alkaline phosphatase l; Has both a phosphomonoesterase and phosphodiesterase activity | 0.573 |
UspA | plcN | DR97_97 | DR97_4608 | annotation not available | Phospholipase c, phosphocholine-specific; Hydrolyzes phosphatidylserine as well as phosphatidylcholine | 0.529 |
UspA | ydgC | DR97_97 | DR97_4354 | annotation not available | Inner membrane protein ydgc; Could play a role in alginate biosynthesis. Overexpression may be lethal | 0.548 |
betA | glpF | DR97_2748 | DR97_4358 | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate | Glycerol uptake facilitator protein; Glycerol enters the cell via the glycerol diffusion facilitator protein. This membrane protein facilitates the movement of glycerol across the cytoplasmic membrane | 0.420 |
betA | plcN | DR97_2748 | DR97_4608 | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate | Phospholipase c, phosphocholine-specific; Hydrolyzes phosphatidylserine as well as phosphatidylcholine | 0.800 |
betA | ydgC | DR97_2748 | DR97_4354 | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate | Inner membrane protein ydgc; Could play a role in alginate biosynthesis. Overexpression may be lethal | 0.683 |
eddB | UspA | DR97_3957 | DR97_97 | annotation not available | annotation not available | 0.534 |
eddB | phoA2 | DR97_3957 | DR97_1431 | annotation not available | Alkaline phosphatase l; Has both a phosphomonoesterase and phosphodiesterase activity | 0.702 |
eddB | plcB | DR97_3957 | DR97_2979 | annotation not available | annotation not available | 0.440 |
eddB | plcN | DR97_3957 | DR97_4608 | annotation not available | Phospholipase c, phosphocholine-specific; Hydrolyzes phosphatidylserine as well as phosphatidylcholine | 0.750 |
eddB | ydgC | DR97_3957 | DR97_4354 | annotation not available | Inner membrane protein ydgc; Could play a role in alginate biosynthesis. Overexpression may be lethal | 0.542 |
glpD | glpF | DR97_4355 | DR97_4358 | annotation not available | Glycerol uptake facilitator protein; Glycerol enters the cell via the glycerol diffusion facilitator protein. This membrane protein facilitates the movement of glycerol across the cytoplasmic membrane | 0.988 |
glpD | glpK1 | DR97_4355 | DR97_4360 | annotation not available | Putative glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate | 0.998 |
glpD | glpK2 | DR97_4355 | DR97_4357 | annotation not available | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate | 0.998 |
glpD | ydgC | DR97_4355 | DR97_4354 | annotation not available | Inner membrane protein ydgc; Could play a role in alginate biosynthesis. Overexpression may be lethal | 0.923 |
glpF | betA | DR97_4358 | DR97_2748 | Glycerol uptake facilitator protein; Glycerol enters the cell via the glycerol diffusion facilitator protein. This membrane protein facilitates the movement of glycerol across the cytoplasmic membrane | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate | 0.420 |
glpF | glpD | DR97_4358 | DR97_4355 | Glycerol uptake facilitator protein; Glycerol enters the cell via the glycerol diffusion facilitator protein. This membrane protein facilitates the movement of glycerol across the cytoplasmic membrane | annotation not available | 0.988 |
glpF | glpK1 | DR97_4358 | DR97_4360 | Glycerol uptake facilitator protein; Glycerol enters the cell via the glycerol diffusion facilitator protein. This membrane protein facilitates the movement of glycerol across the cytoplasmic membrane | Putative glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate | 0.987 |
glpF | glpK2 | DR97_4358 | DR97_4357 | Glycerol uptake facilitator protein; Glycerol enters the cell via the glycerol diffusion facilitator protein. This membrane protein facilitates the movement of glycerol across the cytoplasmic membrane | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate | 0.996 |
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