Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2765 | arcA | DR97_2765 | DR97_2539 | acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily | arcA: arginine deiminase | 0.906 |
DR97_2765 | argA | DR97_2765 | DR97_2573 | acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily | Amino-acid n-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily | 0.668 |
DR97_2765 | argE | DR97_2765 | DR97_2574 | acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily | acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily | 0.834 |
DR97_2765 | argF | DR97_2765 | DR97_4405 | acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase (ArgG) involved in the final step in arginine biosynthesis | 0.971 |
DR97_2765 | argG | DR97_2765 | DR97_4417 | acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily | Belongs to the argininosuccinate synthase family. Type 1 subfamily | 0.975 |
DR97_2765 | argH | DR97_2765 | DR97_2634 | acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily | argH: argininosuccinate lyase | 0.662 |
DR97_2765 | argJ | DR97_2765 | DR97_1580 | acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily | Bifunctional ornithine acetyltransferase/n-acetylglutamate synthase protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate | 0.938 |
arcA | DR97_2765 | DR97_2539 | DR97_2765 | arcA: arginine deiminase | acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily | 0.906 |
arcA | arcC | DR97_2539 | DR97_2541 | arcA: arginine deiminase | arcC: carbamate kinase; Belongs to the carbamate kinase family | 0.997 |
arcA | argE | DR97_2539 | DR97_2574 | arcA: arginine deiminase | acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily | 0.906 |
arcA | argF | DR97_2539 | DR97_4405 | arcA: arginine deiminase | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase (ArgG) involved in the final step in arginine biosynthesis | 0.976 |
arcA | argG | DR97_2539 | DR97_4417 | arcA: arginine deiminase | Belongs to the argininosuccinate synthase family. Type 1 subfamily | 0.931 |
arcA | argH | DR97_2539 | DR97_2634 | arcA: arginine deiminase | argH: argininosuccinate lyase | 0.922 |
arcC | arcA | DR97_2541 | DR97_2539 | arcC: carbamate kinase; Belongs to the carbamate kinase family | arcA: arginine deiminase | 0.997 |
arcC | argF | DR97_2541 | DR97_4405 | arcC: carbamate kinase; Belongs to the carbamate kinase family | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase (ArgG) involved in the final step in arginine biosynthesis | 0.957 |
arcC | carA | DR97_2541 | DR97_2102 | arcC: carbamate kinase; Belongs to the carbamate kinase family | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family | 0.843 |
arcC | carB | DR97_2541 | DR97_2100 | arcC: carbamate kinase; Belongs to the carbamate kinase family | CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family | 0.823 |
argA | DR97_2765 | DR97_2573 | DR97_2765 | Amino-acid n-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily | acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily | 0.668 |
argA | argE | DR97_2573 | DR97_2574 | Amino-acid n-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily | acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily | 0.659 |
argA | argF | DR97_2573 | DR97_4405 | Amino-acid n-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase (ArgG) involved in the final step in arginine biosynthesis | 0.994 |
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